Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 FOSL1P1-201ENST00000511041 816 ntBASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 AC011467.2-201ENST00000598425 242 ntBASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CLDN16Q9Y5I7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 RCN1P2-201ENST00000398357 915 ntBASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 AC114341.1-201ENST00000618070 349 ntBASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 AC006116.8-202ENST00000587620 1550 ntBASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN16Q9Y5I7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 INTS4P1-201ENST00000438455 1935 ntBASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 POM121L3P-201ENST00000419331 1163 ntBASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 MINOS1P3-201ENST00000457048 203 ntBASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 AC009533.2-201ENST00000543664 586 ntBASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 AC138894.3-201ENST00000603787 634 ntBASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 AL732292.2-201ENST00000609649 430 ntBASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN16Q9Y5I7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms