Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 AC011270.2-201ENST00000624293 2550 ntBASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 AGGF1P2-201ENST00000426656 2106 ntBASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 AC133963.1-201ENST00000504166 1679 ntBASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 AL109659.2-201ENST00000606809 1674 ntBASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGB1Q9Y5G3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 MIR4497-201ENST00000583208 89 ntBASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 MTDHP1-201ENST00000605323 784 ntBASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB1Q9Y5G3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 UBALD1-205ENST00000590891 2641 ntBASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGB1Q9Y5G3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms