Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGB3Q9Y5G1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGB3Q9Y5G1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 AC139713.2-201ENST00000641328 2723 ntBASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 AC139887.4-201ENST00000607877 719 ntBASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB3Q9Y5G1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 AC087388.1-201ENST00000571370 1112 ntBASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB3Q9Y5G1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms