Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
R3HCC1Q9Y3T6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 AL513477.1-201ENST00000602865 2407 ntBASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 AL390955.1-201ENST00000428694 934 ntBASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 NAPSB-206ENST00000562112 1266 ntBASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
R3HCC1Q9Y3T6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 AC068418.2-201ENST00000577309 3703 ntBASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 CKBP1-201ENST00000565489 1086 ntBASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.58■□□□□ 0.89
R3HCC1Q9Y3T6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
R3HCC1Q9Y3T6 KRT8P11-201ENST00000409686 1436 ntBASIC20.58■□□□□ 0.88
R3HCC1Q9Y3T6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
R3HCC1Q9Y3T6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
R3HCC1Q9Y3T6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.58■□□□□ 0.88
R3HCC1Q9Y3T6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.58■□□□□ 0.88
R3HCC1Q9Y3T6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
R3HCC1Q9Y3T6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
R3HCC1Q9Y3T6 AC096733.2-201ENST00000609937 1394 ntBASIC20.58■□□□□ 0.88
R3HCC1Q9Y3T6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
R3HCC1Q9Y3T6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 SLC25A6P5-201ENST00000435663 894 ntBASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms