Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 COX5BP2-201ENST00000392354 334 ntBASIC23.36■■□□□ 1.33
SPG7Q9UQ90 YBX2P1-201ENST00000394192 760 ntBASIC23.36■■□□□ 1.33
SPG7Q9UQ90 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 GPX1P2-201ENST00000429271 606 ntBASIC23.36■■□□□ 1.33
SPG7Q9UQ90 AC007967.2-201ENST00000432613 625 ntBASIC23.36■■□□□ 1.33
SPG7Q9UQ90 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 AL139424.1-201ENST00000607572 797 ntBASIC23.36■■□□□ 1.33
SPG7Q9UQ90 PGM5P2-202ENST00000637225 1043 ntBASIC23.36■■□□□ 1.33
SPG7Q9UQ90 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 AC004817.3-201ENST00000602957 2129 ntBASIC23.36■■□□□ 1.33
SPG7Q9UQ90 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SPG7Q9UQ90 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 AC073621.1-201ENST00000392730 636 ntBASIC23.35■■□□□ 1.33
SPG7Q9UQ90 CRCP-205ENST00000431089 942 ntTSL 2 BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 ETFA-208ENST00000559602 792 ntTSL 3 BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 AC005593.1-201ENST00000624894 515 ntBASIC23.35■■□□□ 1.33
SPG7Q9UQ90 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SPG7Q9UQ90 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 DNAJB3-201ENST00000446806 729 ntBASIC23.34■■□□□ 1.33
SPG7Q9UQ90 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 AC073592.5-201ENST00000624854 528 ntBASIC23.34■■□□□ 1.33
SPG7Q9UQ90 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC23.34■■□□□ 1.33
SPG7Q9UQ90 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 PMP22-202ENST00000395936 816 ntTSL 3 BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 FIS1-203ENST00000442303 631 ntTSL 3 BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 MIR3687-2-201ENST00000577708 61 ntBASIC23.33■■□□□ 1.33
SPG7Q9UQ90 MIR3687-1-201ENST00000614492 61 ntBASIC23.33■■□□□ 1.33
SPG7Q9UQ90 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.33■■□□□ 1.33
SPG7Q9UQ90 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPG7Q9UQ90 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SPG7Q9UQ90 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC23.33■■□□□ 1.32
SPG7Q9UQ90 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SPG7Q9UQ90 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
SPG7Q9UQ90 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC23.33■■□□□ 1.32
SPG7Q9UQ90 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
SPG7Q9UQ90 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 BEX3-201ENST00000361298 921 ntTSL 2 BASIC23.32■■□□□ 1.32
SPG7Q9UQ90 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms