Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 PAWRP1-201ENST00000451083 565 ntBASIC18.92■□□□□ 0.62
CHD7Q9P2D1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 AF228730.6-201ENST00000641497 218 ntBASIC18.92■□□□□ 0.62
CHD7Q9P2D1 AC084121.3-201ENST00000641716 218 ntBASIC18.92■□□□□ 0.62
CHD7Q9P2D1 AC105233.6-201ENST00000642093 218 ntBASIC18.92■□□□□ 0.62
CHD7Q9P2D1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 AC092474.2-201ENST00000424288 719 ntBASIC18.91■□□□□ 0.62
CHD7Q9P2D1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 RN7SL204P-201ENST00000582831 262 ntBASIC18.91■□□□□ 0.62
CHD7Q9P2D1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CHD7Q9P2D1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 AC105339.1-204ENST00000636249 355 ntBASIC18.9■□□□□ 0.62
CHD7Q9P2D1 PGM5P2-202ENST00000637225 1043 ntBASIC18.9■□□□□ 0.62
CHD7Q9P2D1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CHD7Q9P2D1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHD7Q9P2D1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CHD7Q9P2D1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHD7Q9P2D1 ESPNP-201ENST00000270691 2015 ntBASIC18.89■□□□□ 0.62
CHD7Q9P2D1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.89■□□□□ 0.61
CHD7Q9P2D1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CHD7Q9P2D1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD7Q9P2D1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms