Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HACD3Q9P035 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HACD3Q9P035 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HACD3Q9P035 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HACD3Q9P035 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.2■□□□□ 0.5
HACD3Q9P035 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HACD3Q9P035 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HACD3Q9P035 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HACD3Q9P035 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.19■□□□□ 0.5
HACD3Q9P035 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
HACD3Q9P035 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
HACD3Q9P035 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HACD3Q9P035 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HACD3Q9P035 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HACD3Q9P035 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HACD3Q9P035 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HACD3Q9P035 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HACD3Q9P035 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.19■□□□□ 0.5
HACD3Q9P035 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.19■□□□□ 0.5
HACD3Q9P035 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.19■□□□□ 0.5
HACD3Q9P035 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.19■□□□□ 0.5
HACD3Q9P035 AP003733.1-201ENST00000491725 852 ntBASIC18.19■□□□□ 0.5
HACD3Q9P035 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.19■□□□□ 0.5
HACD3Q9P035 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.19■□□□□ 0.5
HACD3Q9P035 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HACD3Q9P035 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.19■□□□□ 0.5
HACD3Q9P035 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.19■□□□□ 0.5
HACD3Q9P035 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HACD3Q9P035 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.19■□□□□ 0.5
HACD3Q9P035 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HACD3Q9P035 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HACD3Q9P035 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HACD3Q9P035 REXO1L9P-201ENST00000604264 2108 ntBASIC18.19■□□□□ 0.5
HACD3Q9P035 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.18■□□□□ 0.5
HACD3Q9P035 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.18■□□□□ 0.5
HACD3Q9P035 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.18■□□□□ 0.5
HACD3Q9P035 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.18■□□□□ 0.5
HACD3Q9P035 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 DUTP2-201ENST00000519164 463 ntBASIC18.18■□□□□ 0.5
HACD3Q9P035 VENTXP5-201ENST00000523979 775 ntBASIC18.18■□□□□ 0.5
HACD3Q9P035 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.18■□□□□ 0.5
HACD3Q9P035 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.18■□□□□ 0.5
HACD3Q9P035 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.18■□□□□ 0.5
HACD3Q9P035 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.18■□□□□ 0.5
HACD3Q9P035 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.18■□□□□ 0.5
HACD3Q9P035 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HACD3Q9P035 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HACD3Q9P035 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HACD3Q9P035 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HACD3Q9P035 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 LINC00167-201ENST00000530583 1419 ntBASIC18.17■□□□□ 0.5
HACD3Q9P035 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 AC138028.4-201ENST00000564984 1845 ntBASIC18.17■□□□□ 0.5
HACD3Q9P035 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.17■□□□□ 0.5
HACD3Q9P035 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HACD3Q9P035 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 IGHGP-201ENST00000390555 1178 ntBASIC18.17■□□□□ 0.5
HACD3Q9P035 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.17■□□□□ 0.5
HACD3Q9P035 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.17■□□□□ 0.5
HACD3Q9P035 SLC25A6P5-201ENST00000435663 894 ntBASIC18.17■□□□□ 0.5
HACD3Q9P035 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.17■□□□□ 0.5
HACD3Q9P035 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HACD3Q9P035 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.17■□□□□ 0.5
HACD3Q9P035 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HACD3Q9P035 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
HACD3Q9P035 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
HACD3Q9P035 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HACD3Q9P035 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms