Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 LIN28AP1-201ENST00000429574 405 ntBASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 AC005363.2-201ENST00000618631 242 ntBASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 AC141257.4-201ENST00000634557 245 ntBASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 AC136944.6-201ENST00000634818 245 ntBASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.75■□□□□ 0.27
CTPS2Q9NRF8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 ATP5G1P1-201ENST00000448724 379 ntBASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 LINC01023-201ENST00000606054 436 ntBASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 AC024243.1-201ENST00000609234 778 ntBASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTPS2Q9NRF8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 AC113347.1-201ENST00000413321 391 ntBASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 AC104390.1-201ENST00000555663 520 ntBASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CTPS2Q9NRF8 NEK4P2-201ENST00000580004 1012 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms