Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 AC055876.3-201ENST00000431496 288 ntBASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 CRB3P1-201ENST00000449338 276 ntBASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 AC023141.5-201ENST00000458585 616 ntBASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 AC138649.4-201ENST00000612222 287 ntBASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.06■□□□□ 0.32
CNTNAP3Q9BZ76 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 AC004945.1-201ENST00000416738 983 ntBASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 AC136632.2-201ENST00000512891 861 ntBASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 MIR4751-201ENST00000578027 74 ntBASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 AC006557.2-201ENST00000592985 1240 ntBASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3Q9BZ76 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 AC008556.1-201ENST00000610908 2040 ntBASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 AL596325.1-201ENST00000563991 1082 ntBASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 AL512408.1-201ENST00000569378 2000 ntBASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3Q9BZ76 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms