Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 LTB4R2-202ENST00000528054 3092 ntBASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF4Q9BSR8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 COX11P1-201ENST00000489116 835 ntBASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 AC139887.4-201ENST00000607877 719 ntBASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YIPF4Q9BSR8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 AC011558.1-201ENST00000623459 338 ntBASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
YIPF4Q9BSR8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 AK4P3-201ENST00000418260 669 ntBASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 PVRIG2P-201ENST00000435460 978 ntBASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 BX664615.1-201ENST00000443558 458 ntBASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
YIPF4Q9BSR8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms