Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00479Q96M42 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00479Q96M42 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 GPAT2P1-201ENST00000444924 1672 ntBASIC13.75□□□□□ -0.21
LINC00479Q96M42 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 LINC01126-201ENST00000623515 1646 ntBASIC13.75□□□□□ -0.21
LINC00479Q96M42 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00479Q96M42 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00479Q96M42 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00479Q96M42 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00479Q96M42 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00479Q96M42 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00479Q96M42 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00479Q96M42 AC069152.1-201ENST00000438030 544 ntBASIC13.75□□□□□ -0.21
LINC00479Q96M42 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 AC069544.1-201ENST00000609399 999 ntBASIC13.75□□□□□ -0.21
LINC00479Q96M42 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00479Q96M42 AC106886.4-201ENST00000623557 2502 ntBASIC13.75□□□□□ -0.21
LINC00479Q96M42 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00479Q96M42 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00479Q96M42 CICP6-201ENST00000457191 2729 ntBASIC13.75□□□□□ -0.21
LINC00479Q96M42 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00479Q96M42 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00479Q96M42 AL138688.1-201ENST00000624851 1594 ntBASIC13.75□□□□□ -0.21
LINC00479Q96M42 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00479Q96M42 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 PCDHB19P-201ENST00000570871 2371 ntBASIC13.74□□□□□ -0.21
LINC00479Q96M42 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 AC239809.2-201ENST00000415381 517 ntBASIC13.74□□□□□ -0.21
LINC00479Q96M42 KRT17P3-201ENST00000420566 1262 ntBASIC13.74□□□□□ -0.21
LINC00479Q96M42 MCCD1P1-208ENST00000445732 328 ntBASIC13.74□□□□□ -0.21
LINC00479Q96M42 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 AC133963.1-201ENST00000504166 1679 ntBASIC13.74□□□□□ -0.21
LINC00479Q96M42 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 AC046158.3-201ENST00000624947 2558 ntBASIC13.74□□□□□ -0.21
LINC00479Q96M42 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00479Q96M42 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00479Q96M42 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 AC100803.2-201ENST00000562459 1963 ntBASIC13.73□□□□□ -0.21
LINC00479Q96M42 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00479Q96M42 MIR149-201ENST00000384879 89 ntBASIC13.73□□□□□ -0.21
LINC00479Q96M42 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
LINC00479Q96M42 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms