Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 TSPY7P-201ENST00000431358 1114 ntBASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 AC104390.1-201ENST00000555663 520 ntBASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 WWOX-216ENST00000569818 525 ntBASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 MIR4497-201ENST00000583208 89 ntBASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CHAMP1Q96JM3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHAMP1Q96JM3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.83■□□□□ 0.92
CHAMP1Q96JM3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHAMP1Q96JM3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.83■□□□□ 0.92
CHAMP1Q96JM3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHAMP1Q96JM3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CHAMP1Q96JM3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHAMP1Q96JM3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.83■□□□□ 0.92
CHAMP1Q96JM3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.92
CHAMP1Q96JM3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 AL135905.2-201ENST00000584934 1404 ntBASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 AP005242.2-201ENST00000580065 1175 ntBASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CHAMP1Q96JM3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 LINC00304-203ENST00000565008 1864 ntBASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 REXO1L11P-201ENST00000620964 1927 ntBASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 AL355355.2-201ENST00000442321 338 ntBASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 TSPY15P-201ENST00000457163 923 ntBASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 AC112497.1-201ENST00000624824 639 ntBASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHAMP1Q96JM3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.8■□□□□ 0.92
CHAMP1Q96JM3 AC007663.1-201ENST00000438948 1240 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms