Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 LINC01711-201ENST00000598340 967 ntBASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCD1Q96GM5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 AC097374.2-201ENST00000618617 1306 ntBASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 AC096633.1-201ENST00000422446 749 ntBASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SMARCD1Q96GM5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 AC135050.7-201ENST00000624508 2218 ntBASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 AC011467.2-201ENST00000598425 242 ntBASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 AC138028.4-201ENST00000564984 1845 ntBASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 HCG11-201ENST00000411553 5696 ntBASIC18.85■□□□□ 0.61
SMARCD1Q96GM5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 AC100803.2-201ENST00000562459 1963 ntBASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 AL354751.1-201ENST00000412768 1863 ntBASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 RCN1P2-201ENST00000398357 915 ntBASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 UNC93B7-201ENST00000509439 705 ntBASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCD1Q96GM5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms