Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC9Q92623 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC9Q92623 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TTC9Q92623 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC9Q92623 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
TTC9Q92623 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC9Q92623 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
TTC9Q92623 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TTC9Q92623 RPSAP43-201ENST00000402237 625 ntBASIC17.1■□□□□ 0.33
TTC9Q92623 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC9Q92623 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.1■□□□□ 0.33
TTC9Q92623 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.1■□□□□ 0.33
TTC9Q92623 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.1■□□□□ 0.33
TTC9Q92623 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 AC116407.3-201ENST00000623905 1129 ntBASIC17.1■□□□□ 0.33
TTC9Q92623 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC9Q92623 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9Q92623 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TTC9Q92623 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC9Q92623 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9Q92623 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9Q92623 AC141586.5-201ENST00000624546 2050 ntBASIC17.09■□□□□ 0.33
TTC9Q92623 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9Q92623 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.09■□□□□ 0.33
TTC9Q92623 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9Q92623 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TTC9Q92623 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9Q92623 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TTC9Q92623 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.09■□□□□ 0.33
TTC9Q92623 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC9Q92623 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TTC9Q92623 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC9Q92623 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.09■□□□□ 0.33
TTC9Q92623 AC145285.3-201ENST00000564603 959 ntBASIC17.09■□□□□ 0.33
TTC9Q92623 AC011840.4-201ENST00000578471 627 ntBASIC17.09■□□□□ 0.33
TTC9Q92623 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.09■□□□□ 0.33
TTC9Q92623 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9Q92623 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TTC9Q92623 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC9Q92623 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9Q92623 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9Q92623 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC9Q92623 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9Q92623 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.09■□□□□ 0.33
TTC9Q92623 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TTC9Q92623 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.09■□□□□ 0.33
TTC9Q92623 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TTC9Q92623 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TTC9Q92623 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.08■□□□□ 0.33
TTC9Q92623 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
TTC9Q92623 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TTC9Q92623 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TTC9Q92623 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TTC9Q92623 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TTC9Q92623 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.08■□□□□ 0.33
TTC9Q92623 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.08■□□□□ 0.32
TTC9Q92623 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.08■□□□□ 0.32
TTC9Q92623 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TTC9Q92623 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TTC9Q92623 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TTC9Q92623 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TTC9Q92623 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TTC9Q92623 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TTC9Q92623 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.08■□□□□ 0.32
TTC9Q92623 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TTC9Q92623 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.08■□□□□ 0.32
TTC9Q92623 HNRNPDP1-201ENST00000439535 754 ntBASIC17.08■□□□□ 0.32
TTC9Q92623 SCARNA2-201ENST00000458748 420 ntBASIC17.08■□□□□ 0.32
TTC9Q92623 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.08■□□□□ 0.32
TTC9Q92623 AC010327.4-202ENST00000591484 748 ntBASIC17.08■□□□□ 0.32
TTC9Q92623 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.08■□□□□ 0.32
TTC9Q92623 AC027601.4-201ENST00000611259 610 ntBASIC17.08■□□□□ 0.32
TTC9Q92623 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.08■□□□□ 0.32
TTC9Q92623 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
TTC9Q92623 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TTC9Q92623 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
TTC9Q92623 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.08■□□□□ 0.32
TTC9Q92623 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TTC9Q92623 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.08■□□□□ 0.32
TTC9Q92623 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms