Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 AC108751.1-201ENST00000490852 363 ntBASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNIP1Q8TAD8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 AP002472.1-201ENST00000577490 586 ntBASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 AC011467.4-201ENST00000594891 528 ntBASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 AL022326.1-202ENST00000641533 845 ntBASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNIP1Q8TAD8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNIP1Q8TAD8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
SNIP1Q8TAD8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
SNIP1Q8TAD8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SNIP1Q8TAD8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SNIP1Q8TAD8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 AL035633.1-201ENST00000406139 838 ntBASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 CNN2P11-201ENST00000429351 262 ntBASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 AC244107.1-201ENST00000442033 332 ntBASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 ALG1L5P-201ENST00000482043 771 ntBASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.89■□□□□ 0.29
SNIP1Q8TAD8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms