Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTL9Q8NET4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
RTL9Q8NET4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTL9Q8NET4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTL9Q8NET4 AP000974.1-201ENST00000623909 2387 ntBASIC22.03■■□□□ 1.12
RTL9Q8NET4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RTL9Q8NET4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.03■■□□□ 1.12
RTL9Q8NET4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.03■■□□□ 1.12
RTL9Q8NET4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.03■■□□□ 1.12
RTL9Q8NET4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC22.03■■□□□ 1.12
RTL9Q8NET4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RTL9Q8NET4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.03■■□□□ 1.12
RTL9Q8NET4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTL9Q8NET4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTL9Q8NET4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.03■■□□□ 1.12
RTL9Q8NET4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTL9Q8NET4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.03■■□□□ 1.12
RTL9Q8NET4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.03■■□□□ 1.12
RTL9Q8NET4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.03■■□□□ 1.12
RTL9Q8NET4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
RTL9Q8NET4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTL9Q8NET4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC22.02■■□□□ 1.12
RTL9Q8NET4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTL9Q8NET4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTL9Q8NET4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.02■■□□□ 1.12
RTL9Q8NET4 LAGE3P1-201ENST00000425356 484 ntBASIC22.02■■□□□ 1.12
RTL9Q8NET4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.02■■□□□ 1.12
RTL9Q8NET4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.02■■□□□ 1.12
RTL9Q8NET4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTL9Q8NET4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTL9Q8NET4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
RTL9Q8NET4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTL9Q8NET4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTL9Q8NET4 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.02■■□□□ 1.12
RTL9Q8NET4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.02■■□□□ 1.12
RTL9Q8NET4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTL9Q8NET4 HLA-J-201ENST00000462773 1622 ntBASIC22.02■■□□□ 1.11
RTL9Q8NET4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.11
RTL9Q8NET4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTL9Q8NET4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTL9Q8NET4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC22.01■■□□□ 1.11
RTL9Q8NET4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RTL9Q8NET4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTL9Q8NET4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTL9Q8NET4 SPDYE21P-201ENST00000413323 827 ntBASIC22.01■■□□□ 1.11
RTL9Q8NET4 AC103564.2-201ENST00000432853 1299 ntBASIC22.01■■□□□ 1.11
RTL9Q8NET4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.01■■□□□ 1.11
RTL9Q8NET4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.01■■□□□ 1.11
RTL9Q8NET4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RTL9Q8NET4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTL9Q8NET4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RTL9Q8NET4 ZNF259P1-201ENST00000407656 1365 ntBASIC22.01■■□□□ 1.11
RTL9Q8NET4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.01■■□□□ 1.11
RTL9Q8NET4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.01■■□□□ 1.11
RTL9Q8NET4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.01■■□□□ 1.11
RTL9Q8NET4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTL9Q8NET4 AL353593.2-201ENST00000602529 1483 ntBASIC22.01■■□□□ 1.11
RTL9Q8NET4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.01■■□□□ 1.11
RTL9Q8NET4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.01■■□□□ 1.11
RTL9Q8NET4 WIZP1-201ENST00000531444 2299 ntBASIC22.01■■□□□ 1.11
RTL9Q8NET4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RTL9Q8NET4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTL9Q8NET4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTL9Q8NET4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTL9Q8NET4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22■■□□□ 1.11
RTL9Q8NET4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22■■□□□ 1.11
RTL9Q8NET4 PRYP5-201ENST00000451909 266 ntBASIC22■■□□□ 1.11
RTL9Q8NET4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22■■□□□ 1.11
RTL9Q8NET4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22■■□□□ 1.11
RTL9Q8NET4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22■■□□□ 1.11
RTL9Q8NET4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22■■□□□ 1.11
RTL9Q8NET4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22■■□□□ 1.11
RTL9Q8NET4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22■■□□□ 1.11
RTL9Q8NET4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTL9Q8NET4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTL9Q8NET4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 AC098831.1-202ENST00000438821 336 ntBASIC21.99■■□□□ 1.11
RTL9Q8NET4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.99■■□□□ 1.11
RTL9Q8NET4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms