Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PIK3C3Q8NEB9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PIK3C3Q8NEB9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.89■□□□□ 0.29
PIK3C3Q8NEB9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PIK3C3Q8NEB9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PIK3C3Q8NEB9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PIK3C3Q8NEB9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PIK3C3Q8NEB9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PIK3C3Q8NEB9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PIK3C3Q8NEB9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PIK3C3Q8NEB9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PIK3C3Q8NEB9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PIK3C3Q8NEB9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 AL023806.1-201ENST00000603994 1649 ntBASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 TSPY7P-201ENST00000431358 1114 ntBASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 SNORA78-201ENST00000459373 127 ntBASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 AC093827.2-201ENST00000512654 315 ntBASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 REXO1L10P-201ENST00000615707 1290 ntBASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 REXO1L12P-201ENST00000622156 912 ntBASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PIK3C3Q8NEB9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 AC022211.2-201ENST00000585075 2527 ntBASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 MIR4497-201ENST00000583208 89 ntBASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.87■□□□□ 0.29
PIK3C3Q8NEB9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 AL118508.1-201ENST00000613502 2345 ntBASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 AC066615.1-201ENST00000640911 628 ntBASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.86■□□□□ 0.29
PIK3C3Q8NEB9 AP001094.4-201ENST00000579008 2176 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms