Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 AC012317.2-201ENST00000623305 2251 ntBASIC19■□□□□ 0.63
CCDC50Q8IVM0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 GRAMD4P1-201ENST00000435181 1110 ntBASIC19■□□□□ 0.63
CCDC50Q8IVM0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 AC010653.2-201ENST00000623505 997 ntBASIC19■□□□□ 0.63
CCDC50Q8IVM0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19■□□□□ 0.63
CCDC50Q8IVM0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC50Q8IVM0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 AC128688.1-201ENST00000487626 519 ntBASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 AC093010.1-201ENST00000473625 1624 ntBASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
CCDC50Q8IVM0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 TSPY14P-201ENST00000303979 915 ntBASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC50Q8IVM0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.97■□□□□ 0.63
CCDC50Q8IVM0 INGX-201ENST00000359239 846 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms