Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 AL118508.1-201ENST00000613502 2345 ntBASIC16.02■□□□□ 0.16
LRRC28Q86X40 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 PRSS44-201ENST00000515154 1146 ntBASIC16.02■□□□□ 0.16
LRRC28Q86X40 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
LRRC28Q86X40 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC28Q86X40 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.02■□□□□ 0.15
LRRC28Q86X40 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC28Q86X40 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.02■□□□□ 0.15
LRRC28Q86X40 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC28Q86X40 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC28Q86X40 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC28Q86X40 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC28Q86X40 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC28Q86X40 AL096828.2-201ENST00000567259 1965 ntBASIC16.02■□□□□ 0.15
LRRC28Q86X40 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
LRRC28Q86X40 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.02■□□□□ 0.15
LRRC28Q86X40 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.02■□□□□ 0.15
LRRC28Q86X40 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
LRRC28Q86X40 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC28Q86X40 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
LRRC28Q86X40 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LRRC28Q86X40 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LRRC28Q86X40 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRC28Q86X40 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
LRRC28Q86X40 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 SLC25A1P2-201ENST00000430693 912 ntBASIC16.01■□□□□ 0.15
LRRC28Q86X40 AC128688.1-201ENST00000487626 519 ntBASIC16.01■□□□□ 0.15
LRRC28Q86X40 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRRC28Q86X40 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRRC28Q86X40 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRC28Q86X40 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRC28Q86X40 KRT8P11-201ENST00000409686 1436 ntBASIC16.01■□□□□ 0.15
LRRC28Q86X40 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC28Q86X40 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRRC28Q86X40 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC28Q86X40 MYLKP1-201ENST00000509077 1580 ntBASIC16■□□□□ 0.15
LRRC28Q86X40 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16■□□□□ 0.15
LRRC28Q86X40 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC28Q86X40 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16■□□□□ 0.15
LRRC28Q86X40 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRC28Q86X40 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16■□□□□ 0.15
LRRC28Q86X40 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LRRC28Q86X40 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC28Q86X40 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
LRRC28Q86X40 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC28Q86X40 LINC00602-201ENST00000629776 2065 ntBASIC16■□□□□ 0.15
LRRC28Q86X40 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16■□□□□ 0.15
LRRC28Q86X40 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
LRRC28Q86X40 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16■□□□□ 0.15
LRRC28Q86X40 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16■□□□□ 0.15
LRRC28Q86X40 AC005363.2-201ENST00000618631 242 ntBASIC16■□□□□ 0.15
LRRC28Q86X40 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC28Q86X40 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRC28Q86X40 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms