Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AP002414.1-201ENST00000391405 1147 ntBASIC21.06■□□□□ 0.96
USP50Q70EL3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP50Q70EL3 KLF4P1-201ENST00000412782 1185 ntBASIC21.06■□□□□ 0.96
USP50Q70EL3 AC015922.1-201ENST00000421102 1152 ntBASIC21.06■□□□□ 0.96
USP50Q70EL3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP50Q70EL3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.06■□□□□ 0.96
USP50Q70EL3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.06■□□□□ 0.96
USP50Q70EL3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.06■□□□□ 0.96
USP50Q70EL3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.06■□□□□ 0.96
USP50Q70EL3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.06■□□□□ 0.96
USP50Q70EL3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
USP50Q70EL3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
USP50Q70EL3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.06■□□□□ 0.96
USP50Q70EL3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP50Q70EL3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.06■□□□□ 0.96
USP50Q70EL3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
USP50Q70EL3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP50Q70EL3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP50Q70EL3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP50Q70EL3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.06■□□□□ 0.96
USP50Q70EL3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP50Q70EL3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP50Q70EL3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP50Q70EL3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
USP50Q70EL3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.05■□□□□ 0.96
USP50Q70EL3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
USP50Q70EL3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.05■□□□□ 0.96
USP50Q70EL3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
USP50Q70EL3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
USP50Q70EL3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
USP50Q70EL3 PTCHD3P3-201ENST00000403073 906 ntBASIC21.05■□□□□ 0.96
USP50Q70EL3 PMS2P4-201ENST00000412466 1052 ntBASIC21.05■□□□□ 0.96
USP50Q70EL3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.05■□□□□ 0.96
USP50Q70EL3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.05■□□□□ 0.96
USP50Q70EL3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.05■□□□□ 0.96
USP50Q70EL3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.05■□□□□ 0.96
USP50Q70EL3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP50Q70EL3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.05■□□□□ 0.96
USP50Q70EL3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.05■□□□□ 0.96
USP50Q70EL3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP50Q70EL3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
USP50Q70EL3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP50Q70EL3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.04■□□□□ 0.96
USP50Q70EL3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP50Q70EL3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP50Q70EL3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP50Q70EL3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.04■□□□□ 0.96
USP50Q70EL3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.04■□□□□ 0.96
USP50Q70EL3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.04■□□□□ 0.96
USP50Q70EL3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.04■□□□□ 0.96
USP50Q70EL3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.04■□□□□ 0.96
USP50Q70EL3 AC093520.2-201ENST00000561830 333 ntBASIC21.04■□□□□ 0.96
USP50Q70EL3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.04■□□□□ 0.96
USP50Q70EL3 AL390955.2-201ENST00000603032 514 ntBASIC21.04■□□□□ 0.96
USP50Q70EL3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP50Q70EL3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP50Q70EL3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP50Q70EL3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP50Q70EL3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP50Q70EL3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP50Q70EL3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP50Q70EL3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP50Q70EL3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
USP50Q70EL3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.03■□□□□ 0.96
USP50Q70EL3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.03■□□□□ 0.96
USP50Q70EL3 GMCL1P1-201ENST00000463439 1581 ntBASIC21.03■□□□□ 0.96
USP50Q70EL3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP50Q70EL3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
USP50Q70EL3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP50Q70EL3 AC067863.1-201ENST00000494933 530 ntBASIC21.03■□□□□ 0.96
USP50Q70EL3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.03■□□□□ 0.96
USP50Q70EL3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.03■□□□□ 0.96
USP50Q70EL3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.03■□□□□ 0.96
USP50Q70EL3 AC068137.2-201ENST00000605408 478 ntBASIC21.03■□□□□ 0.96
USP50Q70EL3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.03■□□□□ 0.96
USP50Q70EL3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.03■□□□□ 0.96
USP50Q70EL3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP50Q70EL3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
USP50Q70EL3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
USP50Q70EL3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP50Q70EL3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.03■□□□□ 0.96
USP50Q70EL3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP50Q70EL3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.02■□□□□ 0.96
USP50Q70EL3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP50Q70EL3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP50Q70EL3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms