Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 AC011270.2-201ENST00000624293 2550 ntBASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 LIN28AP1-201ENST00000429574 405 ntBASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 AL512604.3-201ENST00000569583 964 ntBASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 MIR4674-201ENST00000582457 87 ntBASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 BCL2-203ENST00000589955 5011 ntBASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 AL023806.1-201ENST00000603994 1649 ntBASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF111Q6ZNA4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RNF111Q6ZNA4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RNF111Q6ZNA4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 AC113347.1-201ENST00000413321 391 ntBASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 ATP5G1P1-201ENST00000448724 379 ntBASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 AL096828.2-201ENST00000567259 1965 ntBASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 AC112777.1-201ENST00000540175 1423 ntBASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 AL109659.2-201ENST00000606809 1674 ntBASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF111Q6ZNA4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms