Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 AL031133.1-201ENST00000406807 723 ntBASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 FAM8A6P-201ENST00000407496 1135 ntBASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 AC128688.1-201ENST00000487626 519 ntBASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCNI2Q6ZMN8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 GMCL1P1-201ENST00000463439 1581 ntBASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 AP000550.4-202ENST00000639755 178 ntBASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 AL121761.2-201ENST00000598007 1648 ntBASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.06■□□□□ 0.64
CCNI2Q6ZMN8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 AC117947.1-201ENST00000427448 529 ntBASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 AC091390.4-202ENST00000476426 537 ntBASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 KRT8P11-201ENST00000409686 1436 ntBASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNI2Q6ZMN8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms