Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC009065.1-201ENST00000564055 1225 ntBASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 RARRES2P10-201ENST00000564312 460 ntBASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 AL024508.2-201ENST00000607749 1894 ntBASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 SLC25A1P4-201ENST00000567977 778 ntBASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 AC100803.2-201ENST00000562459 1963 ntBASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LINC00242Q5T6M2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 MIR4674-201ENST00000582457 87 ntBASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 DGCR10-201ENST00000609839 495 ntBASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 AC073648.6-201ENST00000641589 218 ntBASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00242Q5T6M2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms