Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 Z98044.1-201ENST00000632503 1764 ntBASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 LTB4R2-202ENST00000528054 3092 ntBASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 AC011467.2-201ENST00000598425 242 ntBASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTC1Q2NKJ3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 AC004832.2-201ENST00000426397 482 ntBASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 ABCD1P5-201ENST00000445663 754 ntBASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 AL138831.2-201ENST00000606564 490 ntBASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 AP000997.3-201ENST00000623333 2250 ntBASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CTC1Q2NKJ3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 AL163051.1-201ENST00000569214 1512 ntBASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 OR7E14P-202ENST00000530490 1290 ntBASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 AC025062.2-201ENST00000605477 670 ntBASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTC1Q2NKJ3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms