Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA1EQ15878 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA1EQ15878 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA1EQ15878 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA1EQ15878 CRYGEP-201ENST00000412192 528 ntBASIC17.4■□□□□ 0.38
CACNA1EQ15878 MKNK2P1-201ENST00000437526 628 ntBASIC17.4■□□□□ 0.38
CACNA1EQ15878 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA1EQ15878 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA1EQ15878 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA1EQ15878 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA1EQ15878 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA1EQ15878 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA1EQ15878 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CACNA1EQ15878 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.39■□□□□ 0.38
CACNA1EQ15878 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CACNA1EQ15878 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CACNA1EQ15878 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA1EQ15878 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.39■□□□□ 0.37
CACNA1EQ15878 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA1EQ15878 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA1EQ15878 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA1EQ15878 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA1EQ15878 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.39■□□□□ 0.37
CACNA1EQ15878 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.39■□□□□ 0.37
CACNA1EQ15878 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.39■□□□□ 0.37
CACNA1EQ15878 SPCS2P1-201ENST00000561636 679 ntBASIC17.39■□□□□ 0.37
CACNA1EQ15878 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.39■□□□□ 0.37
CACNA1EQ15878 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.39■□□□□ 0.37
CACNA1EQ15878 C20orf181-201ENST00000623918 480 ntBASIC17.39■□□□□ 0.37
CACNA1EQ15878 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA1EQ15878 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA1EQ15878 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA1EQ15878 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.39■□□□□ 0.37
CACNA1EQ15878 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA1EQ15878 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA1EQ15878 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA1EQ15878 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CACNA1EQ15878 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA1EQ15878 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CACNA1EQ15878 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.38■□□□□ 0.37
CACNA1EQ15878 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 AC103564.2-201ENST00000432853 1299 ntBASIC17.38■□□□□ 0.37
CACNA1EQ15878 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CACNA1EQ15878 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 AC010654.1-201ENST00000615722 808 ntBASIC17.38■□□□□ 0.37
CACNA1EQ15878 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CACNA1EQ15878 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CACNA1EQ15878 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CACNA1EQ15878 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CACNA1EQ15878 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CACNA1EQ15878 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CACNA1EQ15878 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CACNA1EQ15878 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CACNA1EQ15878 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 AC005829.1-201ENST00000570002 483 ntBASIC17.38■□□□□ 0.37
CACNA1EQ15878 AC027612.4-201ENST00000605371 583 ntBASIC17.38■□□□□ 0.37
CACNA1EQ15878 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CACNA1EQ15878 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.38■□□□□ 0.37
CACNA1EQ15878 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CACNA1EQ15878 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.37■□□□□ 0.37
CACNA1EQ15878 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CACNA1EQ15878 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CACNA1EQ15878 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CACNA1EQ15878 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CACNA1EQ15878 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CACNA1EQ15878 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.37■□□□□ 0.37
CACNA1EQ15878 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.37■□□□□ 0.37
CACNA1EQ15878 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.37■□□□□ 0.37
CACNA1EQ15878 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CACNA1EQ15878 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.37■□□□□ 0.37
CACNA1EQ15878 AC064836.3-201ENST00000607928 673 ntBASIC17.37■□□□□ 0.37
CACNA1EQ15878 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CACNA1EQ15878 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CACNA1EQ15878 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CACNA1EQ15878 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CACNA1EQ15878 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CACNA1EQ15878 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
CACNA1EQ15878 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms