Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SREBF2Q12772 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SREBF2Q12772 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SREBF2Q12772 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.46■□□□□ 0.87
SREBF2Q12772 KLF4P1-201ENST00000412782 1185 ntBASIC20.46■□□□□ 0.87
SREBF2Q12772 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.46■□□□□ 0.87
SREBF2Q12772 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.46■□□□□ 0.87
SREBF2Q12772 HLA-J-202ENST00000469281 1241 ntBASIC20.46■□□□□ 0.87
SREBF2Q12772 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.46■□□□□ 0.87
SREBF2Q12772 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SREBF2Q12772 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
SREBF2Q12772 REXO1L3P-201ENST00000622202 1288 ntBASIC20.46■□□□□ 0.87
SREBF2Q12772 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SREBF2Q12772 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SREBF2Q12772 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.46■□□□□ 0.87
SREBF2Q12772 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SREBF2Q12772 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.46■□□□□ 0.87
SREBF2Q12772 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SREBF2Q12772 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
SREBF2Q12772 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SREBF2Q12772 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.45■□□□□ 0.86
SREBF2Q12772 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SREBF2Q12772 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SREBF2Q12772 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SREBF2Q12772 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SREBF2Q12772 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SREBF2Q12772 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.45■□□□□ 0.86
SREBF2Q12772 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SREBF2Q12772 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SREBF2Q12772 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.45■□□□□ 0.86
SREBF2Q12772 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SREBF2Q12772 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.45■□□□□ 0.86
SREBF2Q12772 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SREBF2Q12772 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SREBF2Q12772 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.45■□□□□ 0.86
SREBF2Q12772 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.45■□□□□ 0.86
SREBF2Q12772 AC067863.1-201ENST00000494933 530 ntBASIC20.45■□□□□ 0.86
SREBF2Q12772 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.45■□□□□ 0.86
SREBF2Q12772 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.45■□□□□ 0.86
SREBF2Q12772 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.45■□□□□ 0.86
SREBF2Q12772 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.45■□□□□ 0.86
SREBF2Q12772 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SREBF2Q12772 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SREBF2Q12772 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.45■□□□□ 0.86
SREBF2Q12772 AC132938.6-201ENST00000623828 1655 ntBASIC20.45■□□□□ 0.86
SREBF2Q12772 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.44■□□□□ 0.86
SREBF2Q12772 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SREBF2Q12772 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
SREBF2Q12772 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SREBF2Q12772 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SREBF2Q12772 AC132938.5-201ENST00000624980 1813 ntBASIC20.44■□□□□ 0.86
SREBF2Q12772 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SREBF2Q12772 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SREBF2Q12772 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SREBF2Q12772 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.44■□□□□ 0.86
SREBF2Q12772 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SREBF2Q12772 AC003669.1-201ENST00000334569 611 ntBASIC20.44■□□□□ 0.86
SREBF2Q12772 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SREBF2Q12772 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.44■□□□□ 0.86
SREBF2Q12772 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SREBF2Q12772 AC015922.1-201ENST00000421102 1152 ntBASIC20.44■□□□□ 0.86
SREBF2Q12772 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.44■□□□□ 0.86
SREBF2Q12772 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.44■□□□□ 0.86
SREBF2Q12772 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.44■□□□□ 0.86
SREBF2Q12772 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.44■□□□□ 0.86
SREBF2Q12772 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.44■□□□□ 0.86
SREBF2Q12772 AC022145.2-201ENST00000598203 171 ntBASIC20.44■□□□□ 0.86
SREBF2Q12772 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SREBF2Q12772 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SREBF2Q12772 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SREBF2Q12772 AL121761.2-201ENST00000598007 1648 ntBASIC20.44■□□□□ 0.86
SREBF2Q12772 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SREBF2Q12772 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SREBF2Q12772 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SREBF2Q12772 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SREBF2Q12772 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.44■□□□□ 0.86
SREBF2Q12772 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.44■□□□□ 0.86
SREBF2Q12772 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SREBF2Q12772 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SREBF2Q12772 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SREBF2Q12772 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SREBF2Q12772 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.43■□□□□ 0.86
SREBF2Q12772 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SREBF2Q12772 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.43■□□□□ 0.86
SREBF2Q12772 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.43■□□□□ 0.86
SREBF2Q12772 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SREBF2Q12772 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.43■□□□□ 0.86
SREBF2Q12772 AP002414.1-201ENST00000391405 1147 ntBASIC20.43■□□□□ 0.86
SREBF2Q12772 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SREBF2Q12772 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.43■□□□□ 0.86
SREBF2Q12772 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.43■□□□□ 0.86
SREBF2Q12772 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.43■□□□□ 0.86
SREBF2Q12772 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.43■□□□□ 0.86
SREBF2Q12772 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.43■□□□□ 0.86
SREBF2Q12772 AC015911.4-201ENST00000588022 1070 ntBASIC20.43■□□□□ 0.86
SREBF2Q12772 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.43■□□□□ 0.86
SREBF2Q12772 AC068137.2-201ENST00000605408 478 ntBASIC20.43■□□□□ 0.86
SREBF2Q12772 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SREBF2Q12772 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.43■□□□□ 0.86
SREBF2Q12772 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms