Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 DUTP2-201ENST00000519164 463 ntBASIC17.34■□□□□ 0.37
HMGCS1Q01581 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 GCSHP2-201ENST00000560971 527 ntBASIC17.34■□□□□ 0.37
HMGCS1Q01581 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 AC012306.2-201ENST00000609350 630 ntBASIC17.34■□□□□ 0.37
HMGCS1Q01581 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 AC097493.4-201ENST00000641197 219 ntBASIC17.34■□□□□ 0.37
HMGCS1Q01581 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.33■□□□□ 0.37
HMGCS1Q01581 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCS1Q01581 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCS1Q01581 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
HMGCS1Q01581 LINC00602-201ENST00000629776 2065 ntBASIC17.33■□□□□ 0.37
HMGCS1Q01581 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HMGCS1Q01581 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
HMGCS1Q01581 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HMGCS1Q01581 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HMGCS1Q01581 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCS1Q01581 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCS1Q01581 LINC00167-201ENST00000530583 1419 ntBASIC17.33■□□□□ 0.36
HMGCS1Q01581 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS1Q01581 AC139713.2-201ENST00000641328 2723 ntBASIC17.33■□□□□ 0.36
HMGCS1Q01581 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HMGCS1Q01581 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS1Q01581 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS1Q01581 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS1Q01581 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS1Q01581 AP000523.1-201ENST00000398242 1049 ntBASIC17.33■□□□□ 0.36
HMGCS1Q01581 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCS1Q01581 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.33■□□□□ 0.36
HMGCS1Q01581 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HMGCS1Q01581 LINC01023-201ENST00000606054 436 ntBASIC17.33■□□□□ 0.36
HMGCS1Q01581 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.33■□□□□ 0.36
HMGCS1Q01581 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HMGCS1Q01581 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.33■□□□□ 0.36
HMGCS1Q01581 AL138966.2-201ENST00000621997 464 ntBASIC17.33■□□□□ 0.36
HMGCS1Q01581 AL023973.1-201ENST00000624619 620 ntBASIC17.33■□□□□ 0.36
HMGCS1Q01581 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS1Q01581 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
HMGCS1Q01581 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS1Q01581 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS1Q01581 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
HMGCS1Q01581 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HMGCS1Q01581 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS1Q01581 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCS1Q01581 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.32■□□□□ 0.36
HMGCS1Q01581 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS1Q01581 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCS1Q01581 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HMGCS1Q01581 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCS1Q01581 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCS1Q01581 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HMGCS1Q01581 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
HMGCS1Q01581 AL355312.1-201ENST00000407115 2176 ntBASIC17.31■□□□□ 0.36
HMGCS1Q01581 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS1Q01581 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS1Q01581 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCS1Q01581 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS1Q01581 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS1Q01581 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS1Q01581 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS1Q01581 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HMGCS1Q01581 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCS1Q01581 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms