Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CPT1AP50416 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPT1AP50416 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPT1AP50416 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPT1AP50416 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.83■□□□□ 0.77
CPT1AP50416 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.83■□□□□ 0.77
CPT1AP50416 YBX2P1-201ENST00000394192 760 ntBASIC19.83■□□□□ 0.77
CPT1AP50416 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.83■□□□□ 0.77
CPT1AP50416 RPSAP43-201ENST00000402237 625 ntBASIC19.83■□□□□ 0.77
CPT1AP50416 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.83■□□□□ 0.77
CPT1AP50416 AC007967.2-201ENST00000432613 625 ntBASIC19.83■□□□□ 0.77
CPT1AP50416 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.83■□□□□ 0.77
CPT1AP50416 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.83■□□□□ 0.77
CPT1AP50416 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.83■□□□□ 0.77
CPT1AP50416 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.83■□□□□ 0.77
CPT1AP50416 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.83■□□□□ 0.77
CPT1AP50416 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CPT1AP50416 AC073592.5-201ENST00000624854 528 ntBASIC19.83■□□□□ 0.77
CPT1AP50416 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.83■□□□□ 0.77
CPT1AP50416 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPT1AP50416 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPT1AP50416 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.83■□□□□ 0.76
CPT1AP50416 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
CPT1AP50416 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPT1AP50416 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPT1AP50416 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CPT1AP50416 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.82■□□□□ 0.76
CPT1AP50416 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CPT1AP50416 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPT1AP50416 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CPT1AP50416 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.82■□□□□ 0.76
CPT1AP50416 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.82■□□□□ 0.76
CPT1AP50416 AC136632.2-201ENST00000512891 861 ntBASIC19.82■□□□□ 0.76
CPT1AP50416 AL589182.2-201ENST00000619332 1049 ntBASIC19.82■□□□□ 0.76
CPT1AP50416 AC055717.3-201ENST00000622967 595 ntBASIC19.82■□□□□ 0.76
CPT1AP50416 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPT1AP50416 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPT1AP50416 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPT1AP50416 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPT1AP50416 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPT1AP50416 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPT1AP50416 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.82■□□□□ 0.76
CPT1AP50416 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPT1AP50416 AC073592.3-201ENST00000625118 1834 ntBASIC19.81■□□□□ 0.76
CPT1AP50416 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPT1AP50416 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPT1AP50416 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.81■□□□□ 0.76
CPT1AP50416 AC004817.3-201ENST00000602957 2129 ntBASIC19.81■□□□□ 0.76
CPT1AP50416 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPT1AP50416 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CPT1AP50416 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CPT1AP50416 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CPT1AP50416 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CPT1AP50416 AC073621.1-201ENST00000392730 636 ntBASIC19.81■□□□□ 0.76
CPT1AP50416 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.81■□□□□ 0.76
CPT1AP50416 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.81■□□□□ 0.76
CPT1AP50416 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPT1AP50416 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPT1AP50416 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.81■□□□□ 0.76
CPT1AP50416 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.81■□□□□ 0.76
CPT1AP50416 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CPT1AP50416 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.81■□□□□ 0.76
CPT1AP50416 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
CPT1AP50416 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.81■□□□□ 0.76
CPT1AP50416 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPT1AP50416 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPT1AP50416 AC002347.1-201ENST00000569543 541 ntBASIC19.81■□□□□ 0.76
CPT1AP50416 AL139424.1-201ENST00000607572 797 ntBASIC19.81■□□□□ 0.76
CPT1AP50416 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.81■□□□□ 0.76
CPT1AP50416 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.81■□□□□ 0.76
CPT1AP50416 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CPT1AP50416 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPT1AP50416 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPT1AP50416 AC120498.9-201ENST00000339021 3867 ntBASIC19.81■□□□□ 0.76
CPT1AP50416 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPT1AP50416 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.81■□□□□ 0.76
CPT1AP50416 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPT1AP50416 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.8■□□□□ 0.76
CPT1AP50416 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CPT1AP50416 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CPT1AP50416 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.8■□□□□ 0.76
CPT1AP50416 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPT1AP50416 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CPT1AP50416 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CPT1AP50416 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.8■□□□□ 0.76
CPT1AP50416 AL020989.1-201ENST00000422979 469 ntBASIC19.8■□□□□ 0.76
CPT1AP50416 AC004832.2-201ENST00000426397 482 ntBASIC19.8■□□□□ 0.76
CPT1AP50416 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.8■□□□□ 0.76
CPT1AP50416 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.8■□□□□ 0.76
CPT1AP50416 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CPT1AP50416 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.8■□□□□ 0.76
CPT1AP50416 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.8■□□□□ 0.76
CPT1AP50416 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms