Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF4P48230 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF4P48230 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.37■□□□□ 0.85
TM4SF4P48230 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF4P48230 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF4P48230 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF4P48230 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF4P48230 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF4P48230 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TM4SF4P48230 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF4P48230 AC003669.1-201ENST00000334569 611 ntBASIC20.36■□□□□ 0.85
TM4SF4P48230 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF4P48230 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.36■□□□□ 0.85
TM4SF4P48230 GAPDHP21-201ENST00000450301 1010 ntBASIC20.36■□□□□ 0.85
TM4SF4P48230 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.36■□□□□ 0.85
TM4SF4P48230 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF4P48230 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.36■□□□□ 0.85
TM4SF4P48230 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.36■□□□□ 0.85
TM4SF4P48230 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF4P48230 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.36■□□□□ 0.85
TM4SF4P48230 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.36■□□□□ 0.85
TM4SF4P48230 AL157384.1-201ENST00000445995 2473 ntBASIC20.36■□□□□ 0.85
TM4SF4P48230 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
TM4SF4P48230 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF4P48230 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM4SF4P48230 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TM4SF4P48230 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
TM4SF4P48230 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.35■□□□□ 0.85
TM4SF4P48230 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF4P48230 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.35■□□□□ 0.85
TM4SF4P48230 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF4P48230 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TM4SF4P48230 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF4P48230 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF4P48230 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.35■□□□□ 0.85
TM4SF4P48230 AC236430.1-201ENST00000402231 743 ntBASIC20.35■□□□□ 0.85
TM4SF4P48230 KLF4P1-201ENST00000412782 1185 ntBASIC20.35■□□□□ 0.85
TM4SF4P48230 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.35■□□□□ 0.85
TM4SF4P48230 AC055876.3-201ENST00000431496 288 ntBASIC20.35■□□□□ 0.85
TM4SF4P48230 AC002472.2-201ENST00000442739 958 ntBASIC20.35■□□□□ 0.85
TM4SF4P48230 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.35■□□□□ 0.85
TM4SF4P48230 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF4P48230 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF4P48230 TERF1P3-201ENST00000505638 1227 ntBASIC20.35■□□□□ 0.85
TM4SF4P48230 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
TM4SF4P48230 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF4P48230 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.35■□□□□ 0.85
TM4SF4P48230 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.35■□□□□ 0.85
TM4SF4P48230 AC138649.4-201ENST00000612222 287 ntBASIC20.35■□□□□ 0.85
TM4SF4P48230 AC009093.7-201ENST00000623853 1223 ntBASIC20.35■□□□□ 0.85
TM4SF4P48230 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.35■□□□□ 0.85
TM4SF4P48230 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
TM4SF4P48230 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF4P48230 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TM4SF4P48230 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TM4SF4P48230 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TM4SF4P48230 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF4P48230 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF4P48230 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.34■□□□□ 0.85
TM4SF4P48230 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF4P48230 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.34■□□□□ 0.85
TM4SF4P48230 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF4P48230 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF4P48230 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF4P48230 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.34■□□□□ 0.85
TM4SF4P48230 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF4P48230 CXCL1P1-201ENST00000502804 216 ntBASIC20.34■□□□□ 0.85
TM4SF4P48230 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TM4SF4P48230 RN7SL204P-201ENST00000582831 262 ntBASIC20.34■□□□□ 0.85
TM4SF4P48230 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
TM4SF4P48230 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF4P48230 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF4P48230 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF4P48230 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF4P48230 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF4P48230 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF4P48230 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TM4SF4P48230 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
TM4SF4P48230 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF4P48230 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TM4SF4P48230 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF4P48230 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF4P48230 AL627223.1-201ENST00000416693 442 ntBASIC20.33■□□□□ 0.85
TM4SF4P48230 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TM4SF4P48230 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.33■□□□□ 0.85
TM4SF4P48230 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF4P48230 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF4P48230 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF4P48230 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.33■□□□□ 0.85
TM4SF4P48230 AL161938.1-201ENST00000569833 2180 ntBASIC20.33■□□□□ 0.85
TM4SF4P48230 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.33■□□□□ 0.84
TM4SF4P48230 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.33■□□□□ 0.84
TM4SF4P48230 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TM4SF4P48230 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
TM4SF4P48230 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF4P48230 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.32■□□□□ 0.84
TM4SF4P48230 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.32■□□□□ 0.84
TM4SF4P48230 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF4P48230 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.32■□□□□ 0.84
TM4SF4P48230 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms