Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
CCNFP41002 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.09■□□□□ 0.49
CCNFP41002 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.09■□□□□ 0.49
CCNFP41002 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.09■□□□□ 0.49
CCNFP41002 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCNFP41002 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNFP41002 AL031432.5-201ENST00000641059 760 ntBASIC18.09■□□□□ 0.49
CCNFP41002 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCNFP41002 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CCNFP41002 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNFP41002 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNFP41002 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNFP41002 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCNFP41002 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCNFP41002 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CCNFP41002 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCNFP41002 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.08■□□□□ 0.49
CCNFP41002 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.49
CCNFP41002 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCNFP41002 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.08■□□□□ 0.49
CCNFP41002 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCNFP41002 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCNFP41002 AL024508.2-201ENST00000607749 1894 ntBASIC18.08■□□□□ 0.49
CCNFP41002 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.08■□□□□ 0.48
CCNFP41002 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.08■□□□□ 0.48
CCNFP41002 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.08■□□□□ 0.48
CCNFP41002 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.08■□□□□ 0.48
CCNFP41002 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 AC010203.1-204ENST00000548782 407 ntBASIC18.08■□□□□ 0.48
CCNFP41002 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.08■□□□□ 0.48
CCNFP41002 AC009065.1-201ENST00000564055 1225 ntBASIC18.08■□□□□ 0.48
CCNFP41002 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.08■□□□□ 0.48
CCNFP41002 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CCNFP41002 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CCNFP41002 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CCNFP41002 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.08■□□□□ 0.48
CCNFP41002 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 BCL2-203ENST00000589955 5011 ntBASIC18.08■□□□□ 0.48
CCNFP41002 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCNFP41002 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNFP41002 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.08■□□□□ 0.48
CCNFP41002 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CCNFP41002 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.07■□□□□ 0.48
CCNFP41002 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNFP41002 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNFP41002 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNFP41002 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.07■□□□□ 0.48
CCNFP41002 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CCNFP41002 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CCNFP41002 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNFP41002 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNFP41002 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCNFP41002 BX664615.1-201ENST00000443558 458 ntBASIC18.07■□□□□ 0.48
CCNFP41002 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.07■□□□□ 0.48
CCNFP41002 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.07■□□□□ 0.48
CCNFP41002 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.07■□□□□ 0.48
CCNFP41002 MIR3180-4-201ENST00000582223 153 ntBASIC18.07■□□□□ 0.48
CCNFP41002 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.07■□□□□ 0.48
CCNFP41002 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCNFP41002 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCNFP41002 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNFP41002 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNFP41002 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNFP41002 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCNFP41002 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.07■□□□□ 0.48
CCNFP41002 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNFP41002 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCNFP41002 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.07■□□□□ 0.48
CCNFP41002 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCNFP41002 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.06■□□□□ 0.48
CCNFP41002 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNFP41002 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNFP41002 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.06■□□□□ 0.48
CCNFP41002 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNFP41002 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.06■□□□□ 0.48
CCNFP41002 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.06■□□□□ 0.48
CCNFP41002 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCNFP41002 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNFP41002 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms