Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.44■□□□□ 0.22
RFC3P40938 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.44■□□□□ 0.22
RFC3P40938 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.44■□□□□ 0.22
RFC3P40938 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.44■□□□□ 0.22
RFC3P40938 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.44■□□□□ 0.22
RFC3P40938 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.44■□□□□ 0.22
RFC3P40938 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RFC3P40938 BNIP3P18-201ENST00000593976 575 ntBASIC16.44■□□□□ 0.22
RFC3P40938 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFC3P40938 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.44■□□□□ 0.22
RFC3P40938 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC3P40938 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RFC3P40938 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RFC3P40938 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC3P40938 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC3P40938 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RFC3P40938 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC3P40938 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RFC3P40938 AP000997.3-201ENST00000623333 2250 ntBASIC16.43■□□□□ 0.22
RFC3P40938 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RFC3P40938 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 AKR1C7P-201ENST00000305623 895 ntBASIC16.43■□□□□ 0.22
RFC3P40938 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC3P40938 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RFC3P40938 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC3P40938 FDX1P1-201ENST00000449115 551 ntBASIC16.43■□□□□ 0.22
RFC3P40938 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC3P40938 AC068472.1-201ENST00000474589 881 ntBASIC16.43■□□□□ 0.22
RFC3P40938 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.43■□□□□ 0.22
RFC3P40938 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.43■□□□□ 0.22
RFC3P40938 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC3P40938 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RFC3P40938 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC3P40938 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC3P40938 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC3P40938 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC3P40938 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RFC3P40938 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.43■□□□□ 0.22
RFC3P40938 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC3P40938 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 ESPNP-201ENST00000270691 2015 ntBASIC16.43■□□□□ 0.22
RFC3P40938 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC3P40938 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC3P40938 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RFC3P40938 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC3P40938 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
RFC3P40938 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC3P40938 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC3P40938 AC093503.3-201ENST00000624917 2352 ntBASIC16.42■□□□□ 0.22
RFC3P40938 BCL2-203ENST00000589955 5011 ntBASIC16.42■□□□□ 0.22
RFC3P40938 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RFC3P40938 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC3P40938 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC3P40938 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC3P40938 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC3P40938 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC3P40938 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC3P40938 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC3P40938 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RFC3P40938 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC3P40938 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC3P40938 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC3P40938 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.42■□□□□ 0.22
RFC3P40938 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.42■□□□□ 0.22
RFC3P40938 AC005336.2-201ENST00000593183 939 ntBASIC16.42■□□□□ 0.22
RFC3P40938 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC3P40938 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC3P40938 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC3P40938 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC3P40938 GMCL1P1-201ENST00000463439 1581 ntBASIC16.42■□□□□ 0.22
RFC3P40938 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RFC3P40938 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms