Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
GDNFP39905 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GDNFP39905 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GDNFP39905 AC046158.3-201ENST00000624947 2558 ntBASIC15.69■□□□□ 0.1
GDNFP39905 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.69■□□□□ 0.1
GDNFP39905 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GDNFP39905 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.68■□□□□ 0.1
GDNFP39905 KRT8P11-201ENST00000409686 1436 ntBASIC15.68■□□□□ 0.1
GDNFP39905 AL135905.2-201ENST00000584934 1404 ntBASIC15.68■□□□□ 0.1
GDNFP39905 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.68■□□□□ 0.1
GDNFP39905 AC008894.3-201ENST00000624324 3103 ntBASIC15.68■□□□□ 0.1
GDNFP39905 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GDNFP39905 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 GMCL1P1-201ENST00000463439 1581 ntBASIC15.68■□□□□ 0.1
GDNFP39905 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.68■□□□□ 0.1
GDNFP39905 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.68■□□□□ 0.1
GDNFP39905 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.68■□□□□ 0.1
GDNFP39905 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.68■□□□□ 0.1
GDNFP39905 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.68■□□□□ 0.1
GDNFP39905 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.68■□□□□ 0.1
GDNFP39905 AL049637.2-201ENST00000641778 930 ntBASIC15.68■□□□□ 0.1
GDNFP39905 AL031985.4-201ENST00000642138 673 ntBASIC15.68■□□□□ 0.1
GDNFP39905 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.68■□□□□ 0.1
GDNFP39905 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GDNFP39905 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.68■□□□□ 0.1
GDNFP39905 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.68■□□□□ 0.1
GDNFP39905 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GDNFP39905 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GDNFP39905 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.67■□□□□ 0.1
GDNFP39905 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
GDNFP39905 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.67■□□□□ 0.1
GDNFP39905 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.67■□□□□ 0.1
GDNFP39905 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GDNFP39905 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.67■□□□□ 0.1
GDNFP39905 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.67■□□□□ 0.1
GDNFP39905 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.67■□□□□ 0.1
GDNFP39905 AC004951.3-201ENST00000418645 1148 ntBASIC15.67■□□□□ 0.1
GDNFP39905 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.67■□□□□ 0.1
GDNFP39905 AC012618.2-201ENST00000428058 849 ntBASIC15.67■□□□□ 0.1
GDNFP39905 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.67■□□□□ 0.1
GDNFP39905 B3GAT3P1-201ENST00000471720 806 ntBASIC15.67■□□□□ 0.1
GDNFP39905 AC008550.1-201ENST00000511500 884 ntBASIC15.67■□□□□ 0.1
GDNFP39905 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.67■□□□□ 0.1
GDNFP39905 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.67■□□□□ 0.1
GDNFP39905 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.67■□□□□ 0.1
GDNFP39905 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.67■□□□□ 0.1
GDNFP39905 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.67■□□□□ 0.1
GDNFP39905 MIR6786-201ENST00000616843 113 ntBASIC15.67■□□□□ 0.1
GDNFP39905 AC011298.2-201ENST00000617989 482 ntBASIC15.67■□□□□ 0.1
GDNFP39905 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.67■□□□□ 0.1
GDNFP39905 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GDNFP39905 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.67■□□□□ 0.1
GDNFP39905 KRT8P3-201ENST00000519669 1449 ntBASIC15.67■□□□□ 0.1
GDNFP39905 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GDNFP39905 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GDNFP39905 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.67■□□□□ 0.1
GDNFP39905 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GDNFP39905 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDNFP39905 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GDNFP39905 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDNFP39905 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDNFP39905 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
GDNFP39905 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDNFP39905 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDNFP39905 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GDNFP39905 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDNFP39905 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GDNFP39905 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.66■□□□□ 0.1
GDNFP39905 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms