Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KRT20P35900 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT20P35900 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
KRT20P35900 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT20P35900 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT20P35900 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KRT20P35900 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KRT20P35900 OR6D1P-203ENST00000641209 4860 ntBASIC17.11■□□□□ 0.33
KRT20P35900 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT20P35900 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KRT20P35900 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT20P35900 AL499627.1-201ENST00000569373 2188 ntBASIC17.11■□□□□ 0.33
KRT20P35900 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KRT20P35900 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT20P35900 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
KRT20P35900 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT20P35900 KRT18P57-201ENST00000443599 1254 ntBASIC17.11■□□□□ 0.33
KRT20P35900 COX11P1-201ENST00000489116 835 ntBASIC17.11■□□□□ 0.33
KRT20P35900 KRT18P41-201ENST00000518924 1277 ntBASIC17.11■□□□□ 0.33
KRT20P35900 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT20P35900 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT20P35900 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 AC092865.7-201ENST00000641832 219 ntBASIC17.11■□□□□ 0.33
KRT20P35900 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT20P35900 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KRT20P35900 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KRT20P35900 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.11■□□□□ 0.33
KRT20P35900 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KRT20P35900 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KRT20P35900 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KRT20P35900 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
KRT20P35900 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
KRT20P35900 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT20P35900 MYLKP1-201ENST00000509077 1580 ntBASIC17.11■□□□□ 0.33
KRT20P35900 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT20P35900 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
KRT20P35900 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT20P35900 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.1■□□□□ 0.33
KRT20P35900 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT20P35900 AC024243.1-201ENST00000609234 778 ntBASIC17.1■□□□□ 0.33
KRT20P35900 AL138966.2-201ENST00000621997 464 ntBASIC17.1■□□□□ 0.33
KRT20P35900 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.1■□□□□ 0.33
KRT20P35900 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KRT20P35900 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT20P35900 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.1■□□□□ 0.33
KRT20P35900 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT20P35900 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT20P35900 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT20P35900 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT20P35900 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
KRT20P35900 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KRT20P35900 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT20P35900 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT20P35900 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KRT20P35900 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms