Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PTPN7P35236 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN7P35236 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PTPN7P35236 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN7P35236 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.59■□□□□ 0.57
PTPN7P35236 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PTPN7P35236 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN7P35236 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN7P35236 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN7P35236 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN7P35236 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN7P35236 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
PTPN7P35236 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN7P35236 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN7P35236 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN7P35236 AL391807.1-203ENST00000604392 2365 ntBASIC18.58■□□□□ 0.56
PTPN7P35236 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
PTPN7P35236 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN7P35236 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN7P35236 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN7P35236 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN7P35236 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.58■□□□□ 0.56
PTPN7P35236 AC079602.3-201ENST00000623931 403 ntBASIC18.58■□□□□ 0.56
PTPN7P35236 AL023973.1-201ENST00000624619 620 ntBASIC18.58■□□□□ 0.56
PTPN7P35236 AL031432.5-201ENST00000641059 760 ntBASIC18.58■□□□□ 0.56
PTPN7P35236 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN7P35236 HLA-J-201ENST00000462773 1622 ntBASIC18.58■□□□□ 0.56
PTPN7P35236 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PTPN7P35236 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PTPN7P35236 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN7P35236 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN7P35236 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
PTPN7P35236 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PTPN7P35236 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN7P35236 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN7P35236 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN7P35236 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN7P35236 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN7P35236 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PTPN7P35236 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN7P35236 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN7P35236 KRT8P47-201ENST00000604727 1398 ntBASIC18.57■□□□□ 0.56
PTPN7P35236 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN7P35236 LTB4R2-202ENST00000528054 3092 ntBASIC18.57■□□□□ 0.56
PTPN7P35236 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN7P35236 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN7P35236 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN7P35236 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTPN7P35236 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
PTPN7P35236 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PTPN7P35236 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.57■□□□□ 0.56
PTPN7P35236 HLA-F-220ENST00000434407 884 ntBASIC18.57■□□□□ 0.56
PTPN7P35236 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN7P35236 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN7P35236 AL136038.4-201ENST00000603606 1261 ntBASIC18.57■□□□□ 0.56
PTPN7P35236 LINC01451-201ENST00000623792 534 ntBASIC18.57■□□□□ 0.56
PTPN7P35236 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTPN7P35236 AC141586.5-201ENST00000624546 2050 ntBASIC18.57■□□□□ 0.56
PTPN7P35236 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN7P35236 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PTPN7P35236 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PTPN7P35236 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN7P35236 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN7P35236 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PTPN7P35236 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN7P35236 AC108860.2-201ENST00000562760 2183 ntBASIC18.57■□□□□ 0.56
PTPN7P35236 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPN7P35236 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN7P35236 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PTPN7P35236 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPN7P35236 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN7P35236 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PTPN7P35236 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPN7P35236 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PTPN7P35236 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
PTPN7P35236 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PTPN7P35236 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
PTPN7P35236 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN7P35236 AC009949.1-201ENST00000623048 1830 ntBASIC18.56■□□□□ 0.56
PTPN7P35236 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN7P35236 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN7P35236 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN7P35236 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN7P35236 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms