Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
XRCC1P18887 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
XRCC1P18887 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
XRCC1P18887 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.93■□□□□ 0.46
XRCC1P18887 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.93■□□□□ 0.46
XRCC1P18887 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
XRCC1P18887 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.93■□□□□ 0.46
XRCC1P18887 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
XRCC1P18887 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 AC112777.1-201ENST00000540175 1423 ntBASIC17.93■□□□□ 0.46
XRCC1P18887 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
XRCC1P18887 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.93■□□□□ 0.46
XRCC1P18887 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.93■□□□□ 0.46
XRCC1P18887 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.93■□□□□ 0.46
XRCC1P18887 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
XRCC1P18887 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.93■□□□□ 0.46
XRCC1P18887 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.93■□□□□ 0.46
XRCC1P18887 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.93■□□□□ 0.46
XRCC1P18887 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.93■□□□□ 0.46
XRCC1P18887 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.93■□□□□ 0.46
XRCC1P18887 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
XRCC1P18887 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.93■□□□□ 0.46
XRCC1P18887 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
XRCC1P18887 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.93■□□□□ 0.46
XRCC1P18887 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
XRCC1P18887 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
XRCC1P18887 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
XRCC1P18887 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
XRCC1P18887 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
XRCC1P18887 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
XRCC1P18887 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.92■□□□□ 0.46
XRCC1P18887 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
XRCC1P18887 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
XRCC1P18887 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
XRCC1P18887 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
XRCC1P18887 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.92■□□□□ 0.46
XRCC1P18887 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.92■□□□□ 0.46
XRCC1P18887 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
XRCC1P18887 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
XRCC1P18887 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
XRCC1P18887 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
XRCC1P18887 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.92■□□□□ 0.46
XRCC1P18887 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
XRCC1P18887 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
XRCC1P18887 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.92■□□□□ 0.46
XRCC1P18887 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
XRCC1P18887 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.92■□□□□ 0.46
XRCC1P18887 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
XRCC1P18887 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.91■□□□□ 0.46
XRCC1P18887 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.91■□□□□ 0.46
XRCC1P18887 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.91■□□□□ 0.46
XRCC1P18887 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.91■□□□□ 0.46
XRCC1P18887 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
XRCC1P18887 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
XRCC1P18887 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.91■□□□□ 0.46
XRCC1P18887 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.91■□□□□ 0.46
XRCC1P18887 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.91■□□□□ 0.46
XRCC1P18887 AC093458.2-201ENST00000623150 629 ntBASIC17.91■□□□□ 0.46
XRCC1P18887 PCDHA12-202ENST00000613593 2588 ntBASIC17.91■□□□□ 0.46
XRCC1P18887 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
XRCC1P18887 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
XRCC1P18887 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XRCC1P18887 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
XRCC1P18887 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XRCC1P18887 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XRCC1P18887 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
XRCC1P18887 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.9■□□□□ 0.46
XRCC1P18887 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.9■□□□□ 0.46
XRCC1P18887 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
XRCC1P18887 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.9■□□□□ 0.46
XRCC1P18887 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
XRCC1P18887 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
XRCC1P18887 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms