Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.01■□□□□ 0.31
NCK1P16333 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NCK1P16333 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
NCK1P16333 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
NCK1P16333 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
NCK1P16333 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17■□□□□ 0.31
NCK1P16333 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 MFAP1P1-201ENST00000442257 1255 ntBASIC17■□□□□ 0.31
NCK1P16333 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17■□□□□ 0.31
NCK1P16333 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 C1QBPP2-201ENST00000528754 825 ntBASIC17■□□□□ 0.31
NCK1P16333 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17■□□□□ 0.31
NCK1P16333 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17■□□□□ 0.31
NCK1P16333 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17■□□□□ 0.31
NCK1P16333 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17■□□□□ 0.31
NCK1P16333 AC096733.2-201ENST00000609937 1394 ntBASIC17■□□□□ 0.31
NCK1P16333 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NCK1P16333 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NCK1P16333 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCK1P16333 AL024508.2-201ENST00000607749 1894 ntBASIC16.99■□□□□ 0.31
NCK1P16333 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 AL138688.1-201ENST00000624851 1594 ntBASIC16.99■□□□□ 0.31
NCK1P16333 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.99■□□□□ 0.31
NCK1P16333 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NCK1P16333 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 KRT18P23-201ENST00000435622 1283 ntBASIC16.99■□□□□ 0.31
NCK1P16333 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.99■□□□□ 0.31
NCK1P16333 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.99■□□□□ 0.31
NCK1P16333 AC006058.3-201ENST00000606217 1069 ntBASIC16.99■□□□□ 0.31
NCK1P16333 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.99■□□□□ 0.31
NCK1P16333 AC133963.1-201ENST00000504166 1679 ntBASIC16.99■□□□□ 0.31
NCK1P16333 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.99■□□□□ 0.31
NCK1P16333 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NCK1P16333 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NCK1P16333 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.99■□□□□ 0.31
NCK1P16333 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.99■□□□□ 0.31
NCK1P16333 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.99■□□□□ 0.31
NCK1P16333 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NCK1P16333 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
NCK1P16333 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
NCK1P16333 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCK1P16333 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.98■□□□□ 0.31
NCK1P16333 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.98■□□□□ 0.31
NCK1P16333 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCK1P16333 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCK1P16333 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NCK1P16333 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
NCK1P16333 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCK1P16333 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NCK1P16333 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCK1P16333 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCK1P16333 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCK1P16333 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.98■□□□□ 0.31
NCK1P16333 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.98■□□□□ 0.31
NCK1P16333 FAM197Y1-201ENST00000421178 764 ntBASIC16.98■□□□□ 0.31
NCK1P16333 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.98■□□□□ 0.31
NCK1P16333 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCK1P16333 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCK1P16333 AC090192.1-201ENST00000517740 490 ntBASIC16.98■□□□□ 0.31
NCK1P16333 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NCK1P16333 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCK1P16333 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NCK1P16333 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NCK1P16333 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NCK1P16333 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCK1P16333 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms