Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.72■□□□□ 0.43
CAPN1P07384 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 ZNF444P1-201ENST00000559497 298 ntBASIC17.72■□□□□ 0.43
CAPN1P07384 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.72■□□□□ 0.43
CAPN1P07384 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.72■□□□□ 0.43
CAPN1P07384 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN1P07384 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.72■□□□□ 0.43
CAPN1P07384 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CAPN1P07384 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CAPN1P07384 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.71■□□□□ 0.43
CAPN1P07384 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.71■□□□□ 0.43
CAPN1P07384 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CAPN1P07384 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CAPN1P07384 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CAPN1P07384 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CAPN1P07384 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CAPN1P07384 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CAPN1P07384 GNAS-203ENST00000306120 1878 ntBASIC17.71■□□□□ 0.43
CAPN1P07384 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.71■□□□□ 0.43
CAPN1P07384 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CAPN1P07384 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.71■□□□□ 0.42
CAPN1P07384 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CAPN1P07384 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 AP000997.3-201ENST00000623333 2250 ntBASIC17.7■□□□□ 0.42
CAPN1P07384 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CAPN1P07384 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN1P07384 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPN1P07384 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPN1P07384 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPN1P07384 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPN1P07384 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.7■□□□□ 0.42
CAPN1P07384 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPN1P07384 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPN1P07384 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN1P07384 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
CAPN1P07384 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CAPN1P07384 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CAPN1P07384 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 LINC01311-201ENST00000565162 1445 ntBASIC17.7■□□□□ 0.42
CAPN1P07384 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPN1P07384 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPN1P07384 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN1P07384 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CAPN1P07384 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CAPN1P07384 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CAPN1P07384 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPN1P07384 VENTXP5-201ENST00000523979 775 ntBASIC17.69■□□□□ 0.42
CAPN1P07384 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
CAPN1P07384 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPN1P07384 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.69■□□□□ 0.42
CAPN1P07384 PKD1P1-201ENST00000458669 6805 ntBASIC17.69■□□□□ 0.42
CAPN1P07384 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms