Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.06■□□□□ 0.16
CDRT1O95170 PCDH8P1-201ENST00000428983 2773 ntBASIC16.06■□□□□ 0.16
CDRT1O95170 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.06■□□□□ 0.16
CDRT1O95170 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
CDRT1O95170 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 PCDHB19P-201ENST00000570871 2371 ntBASIC16.06■□□□□ 0.16
CDRT1O95170 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDRT1O95170 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDRT1O95170 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDRT1O95170 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CDRT1O95170 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CDRT1O95170 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDRT1O95170 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.06■□□□□ 0.16
CDRT1O95170 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDRT1O95170 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDRT1O95170 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 KRT16P5-201ENST00000455284 522 ntBASIC16.06■□□□□ 0.16
CDRT1O95170 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.06■□□□□ 0.16
CDRT1O95170 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.06■□□□□ 0.16
CDRT1O95170 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
CDRT1O95170 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.06■□□□□ 0.16
CDRT1O95170 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CDRT1O95170 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.06■□□□□ 0.16
CDRT1O95170 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDRT1O95170 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CDRT1O95170 CICP6-201ENST00000457191 2729 ntBASIC16.06■□□□□ 0.16
CDRT1O95170 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.06■□□□□ 0.16
CDRT1O95170 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.06■□□□□ 0.16
CDRT1O95170 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CDRT1O95170 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT1O95170 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 AL138688.1-201ENST00000624851 1594 ntBASIC16.05■□□□□ 0.16
CDRT1O95170 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.05■□□□□ 0.16
CDRT1O95170 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDRT1O95170 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDRT1O95170 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.05■□□□□ 0.16
CDRT1O95170 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.05■□□□□ 0.16
CDRT1O95170 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.05■□□□□ 0.16
CDRT1O95170 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.05■□□□□ 0.16
CDRT1O95170 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDRT1O95170 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.05■□□□□ 0.16
CDRT1O95170 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.05■□□□□ 0.16
CDRT1O95170 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.05■□□□□ 0.16
CDRT1O95170 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CDRT1O95170 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDRT1O95170 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.05■□□□□ 0.16
CDRT1O95170 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CDRT1O95170 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.05■□□□□ 0.16
CDRT1O95170 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.05■□□□□ 0.16
CDRT1O95170 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.05■□□□□ 0.16
CDRT1O95170 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.05■□□□□ 0.16
CDRT1O95170 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDRT1O95170 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.05■□□□□ 0.16
CDRT1O95170 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.05■□□□□ 0.16
CDRT1O95170 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CDRT1O95170 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.05■□□□□ 0.16
CDRT1O95170 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CDRT1O95170 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.05■□□□□ 0.16
CDRT1O95170 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT1O95170 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CDRT1O95170 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDRT1O95170 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.04■□□□□ 0.16
CDRT1O95170 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.04■□□□□ 0.16
CDRT1O95170 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms