Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC7.95□□□□□ -1.14
USH2AO75445 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
USH2AO75445 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC7.95□□□□□ -1.14
USH2AO75445 RPL28-206ENST00000558752 671 ntTSL 3 BASIC7.95□□□□□ -1.14
USH2AO75445 AC010654.1-201ENST00000615722 808 ntBASIC7.95□□□□□ -1.14
USH2AO75445 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 LINC00565-201ENST00000562710 2331 ntBASIC7.95□□□□□ -1.14
USH2AO75445 SDHAP2-201ENST00000455183 2001 ntBASIC7.95□□□□□ -1.14
USH2AO75445 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC7.95□□□□□ -1.14
USH2AO75445 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
USH2AO75445 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC7.95□□□□□ -1.14
USH2AO75445 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC7.95□□□□□ -1.14
USH2AO75445 GPR182-203ENST00000622922 591 ntBASIC7.95□□□□□ -1.14
USH2AO75445 PGM5P2-202ENST00000637225 1043 ntBASIC7.95□□□□□ -1.14
USH2AO75445 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
USH2AO75445 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
USH2AO75445 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC7.95□□□□□ -1.14
USH2AO75445 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC7.95□□□□□ -1.14
USH2AO75445 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC7.95□□□□□ -1.14
USH2AO75445 SLC25A39P2-201ENST00000537614 270 ntBASIC7.95□□□□□ -1.14
USH2AO75445 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC7.95□□□□□ -1.14
USH2AO75445 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC7.95□□□□□ -1.14
USH2AO75445 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC7.95□□□□□ -1.14
USH2AO75445 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC7.95□□□□□ -1.14
USH2AO75445 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 AL133338.1-201ENST00000565695 1517 ntBASIC7.95□□□□□ -1.14
USH2AO75445 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
USH2AO75445 AL627223.1-201ENST00000416693 442 ntBASIC7.95□□□□□ -1.14
USH2AO75445 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USH2AO75445 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC7.95□□□□□ -1.14
USH2AO75445 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC7.95□□□□□ -1.14
USH2AO75445 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC7.95□□□□□ -1.14
USH2AO75445 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC7.95□□□□□ -1.14
USH2AO75445 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
USH2AO75445 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC7.94□□□□□ -1.14
USH2AO75445 LBX2-AS1-202ENST00000603175 2083 ntBASIC7.94□□□□□ -1.14
USH2AO75445 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
USH2AO75445 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 AC112492.5-201ENST00000421897 457 ntBASIC7.94□□□□□ -1.14
USH2AO75445 TP53TG3HP-202ENST00000569755 579 ntBASIC7.94□□□□□ -1.14
USH2AO75445 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC7.94□□□□□ -1.14
USH2AO75445 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC7.94□□□□□ -1.14
USH2AO75445 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
USH2AO75445 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC7.94□□□□□ -1.14
USH2AO75445 DDX43P3-201ENST00000441064 443 ntBASIC7.94□□□□□ -1.14
USH2AO75445 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC7.94□□□□□ -1.14
USH2AO75445 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 RAB34-224ENST00000636513 888 ntTSL 5 BASIC7.94□□□□□ -1.14
USH2AO75445 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC7.94□□□□□ -1.14
USH2AO75445 SIRPAP1-201ENST00000448467 1770 ntBASIC7.94□□□□□ -1.14
USH2AO75445 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC7.94□□□□□ -1.14
USH2AO75445 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 MTMR9LP-203ENST00000426597 1545 ntBASIC7.94□□□□□ -1.14
USH2AO75445 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
USH2AO75445 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
USH2AO75445 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC7.94□□□□□ -1.14
USH2AO75445 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms