Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM13O60858 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.71■□□□□ 0.43
TRIM13O60858 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.71■□□□□ 0.43
TRIM13O60858 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM13O60858 AC142381.4-202ENST00000563973 229 ntBASIC17.71■□□□□ 0.43
TRIM13O60858 AC026471.5-201ENST00000615068 467 ntBASIC17.71■□□□□ 0.43
TRIM13O60858 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRIM13O60858 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM13O60858 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM13O60858 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM13O60858 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM13O60858 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
TRIM13O60858 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM13O60858 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM13O60858 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM13O60858 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM13O60858 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRIM13O60858 AC092338.2-201ENST00000568827 1415 ntBASIC17.71■□□□□ 0.43
TRIM13O60858 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM13O60858 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM13O60858 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM13O60858 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
TRIM13O60858 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.71■□□□□ 0.42
TRIM13O60858 AC022898.2-201ENST00000616822 1312 ntBASIC17.71■□□□□ 0.42
TRIM13O60858 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM13O60858 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
TRIM13O60858 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM13O60858 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRIM13O60858 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRIM13O60858 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
TRIM13O60858 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRIM13O60858 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRIM13O60858 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM13O60858 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.7■□□□□ 0.42
TRIM13O60858 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM13O60858 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM13O60858 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.7■□□□□ 0.42
TRIM13O60858 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM13O60858 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 AC010240.3-201ENST00000607688 395 ntBASIC17.7■□□□□ 0.42
TRIM13O60858 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM13O60858 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
TRIM13O60858 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
TRIM13O60858 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM13O60858 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM13O60858 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM13O60858 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM13O60858 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
TRIM13O60858 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM13O60858 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM13O60858 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM13O60858 CCR12P-201ENST00000446203 998 ntBASIC17.69■□□□□ 0.42
TRIM13O60858 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
TRIM13O60858 BX088651.1-201ENST00000540551 451 ntBASIC17.69■□□□□ 0.42
TRIM13O60858 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM13O60858 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM13O60858 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM13O60858 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM13O60858 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms