Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDH7O60245 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PCDH7O60245 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDH7O60245 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDH7O60245 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PCDH7O60245 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH7O60245 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.19■□□□□ 0.34
PCDH7O60245 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDH7O60245 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PCDH7O60245 AC024563.2-201ENST00000603282 481 ntBASIC17.19■□□□□ 0.34
PCDH7O60245 AL136038.4-201ENST00000603606 1261 ntBASIC17.19■□□□□ 0.34
PCDH7O60245 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PCDH7O60245 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDH7O60245 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDH7O60245 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.19■□□□□ 0.34
PCDH7O60245 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH7O60245 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDH7O60245 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 AC022898.2-201ENST00000616822 1312 ntBASIC17.19■□□□□ 0.34
PCDH7O60245 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH7O60245 AC100803.2-201ENST00000562459 1963 ntBASIC17.19■□□□□ 0.34
PCDH7O60245 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDH7O60245 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH7O60245 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PCDH7O60245 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH7O60245 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH7O60245 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH7O60245 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH7O60245 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH7O60245 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH7O60245 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PCDH7O60245 SPDYE15P-201ENST00000424157 909 ntBASIC17.18■□□□□ 0.34
PCDH7O60245 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.18■□□□□ 0.34
PCDH7O60245 BX664615.1-201ENST00000443558 458 ntBASIC17.18■□□□□ 0.34
PCDH7O60245 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDH7O60245 AC113404.2-201ENST00000507884 177 ntBASIC17.18■□□□□ 0.34
PCDH7O60245 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH7O60245 AC139887.4-201ENST00000607877 719 ntBASIC17.18■□□□□ 0.34
PCDH7O60245 AC011558.1-201ENST00000623459 338 ntBASIC17.18■□□□□ 0.34
PCDH7O60245 AC079602.3-201ENST00000623931 403 ntBASIC17.18■□□□□ 0.34
PCDH7O60245 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH7O60245 AL391807.1-203ENST00000604392 2365 ntBASIC17.18■□□□□ 0.34
PCDH7O60245 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH7O60245 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH7O60245 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDH7O60245 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH7O60245 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH7O60245 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH7O60245 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH7O60245 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH7O60245 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH7O60245 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH7O60245 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDH7O60245 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH7O60245 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 YBX1P2-201ENST00000489612 999 ntBASIC17.17■□□□□ 0.34
PCDH7O60245 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDH7O60245 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PCDH7O60245 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH7O60245 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PCDH7O60245 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH7O60245 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH7O60245 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDH7O60245 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH7O60245 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PCDH7O60245 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH7O60245 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH7O60245 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH7O60245 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH7O60245 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms