Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CHD2O14647 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CHD2O14647 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CHD2O14647 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC24.79■■□□□ 1.56
CHD2O14647 AL035252.4-201ENST00000624174 288 ntBASIC24.79■■□□□ 1.56
CHD2O14647 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
CHD2O14647 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHD2O14647 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
CHD2O14647 AC025580.3-201ENST00000617932 1424 ntBASIC24.79■■□□□ 1.56
CHD2O14647 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CHD2O14647 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC24.79■■□□□ 1.56
CHD2O14647 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHD2O14647 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CHD2O14647 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC24.79■■□□□ 1.56
CHD2O14647 AC069262.1-201ENST00000539058 672 ntBASIC24.79■■□□□ 1.56
CHD2O14647 AC015911.4-201ENST00000588022 1070 ntBASIC24.79■■□□□ 1.56
CHD2O14647 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
CHD2O14647 AC004835.2-201ENST00000603762 682 ntBASIC24.79■■□□□ 1.56
CHD2O14647 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC24.79■■□□□ 1.56
CHD2O14647 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CHD2O14647 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHD2O14647 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CHD2O14647 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.78■■□□□ 1.56
CHD2O14647 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CHD2O14647 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHD2O14647 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC24.78■■□□□ 1.56
CHD2O14647 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC24.78■■□□□ 1.56
CHD2O14647 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHD2O14647 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHD2O14647 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CHD2O14647 AC093214.1-201ENST00000511688 1107 ntBASIC24.78■■□□□ 1.56
CHD2O14647 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC24.78■■□□□ 1.56
CHD2O14647 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC24.78■■□□□ 1.56
CHD2O14647 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC24.78■■□□□ 1.56
CHD2O14647 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHD2O14647 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHD2O14647 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CHD2O14647 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CHD2O14647 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CHD2O14647 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC24.77■■□□□ 1.56
CHD2O14647 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC24.77■■□□□ 1.56
CHD2O14647 AC074386.1-202ENST00000463561 864 ntBASIC24.77■■□□□ 1.56
CHD2O14647 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC24.77■■□□□ 1.56
CHD2O14647 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC24.77■■□□□ 1.56
CHD2O14647 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 AC093520.2-201ENST00000561830 333 ntBASIC24.77■■□□□ 1.56
CHD2O14647 AC023141.13-201ENST00000604991 943 ntBASIC24.77■■□□□ 1.56
CHD2O14647 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
CHD2O14647 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC24.77■■□□□ 1.56
CHD2O14647 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC24.77■■□□□ 1.56
CHD2O14647 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC24.77■■□□□ 1.56
CHD2O14647 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 AL627223.1-201ENST00000416693 442 ntBASIC24.77■■□□□ 1.56
CHD2O14647 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC24.77■■□□□ 1.56
CHD2O14647 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC24.77■■□□□ 1.56
CHD2O14647 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC24.77■■□□□ 1.56
CHD2O14647 AL353135.1-201ENST00000606729 504 ntBASIC24.77■■□□□ 1.56
CHD2O14647 REM2-202ENST00000536884 1331 ntTSL 2 BASIC24.77■■□□□ 1.56
CHD2O14647 BSG-215ENST00000618006 1329 ntTSL 2 BASIC24.77■■□□□ 1.56
CHD2O14647 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC24.77■■□□□ 1.56
CHD2O14647 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD2O14647 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.56
CHD2O14647 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHD2O14647 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHD2O14647 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHD2O14647 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC24.76■■□□□ 1.55
CHD2O14647 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
CHD2O14647 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHD2O14647 LINC00628-201ENST00000628516 1289 ntBASIC24.76■■□□□ 1.55
CHD2O14647 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHD2O14647 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHD2O14647 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC24.76■■□□□ 1.55
CHD2O14647 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHD2O14647 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
CHD2O14647 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHD2O14647 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHD2O14647 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHD2O14647 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHD2O14647 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC24.75■■□□□ 1.55
CHD2O14647 PMS2P4-201ENST00000412466 1052 ntBASIC24.75■■□□□ 1.55
CHD2O14647 GSAP-205ENST00000430584 600 ntTSL 5 BASIC24.75■■□□□ 1.55
CHD2O14647 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC24.75■■□□□ 1.55
CHD2O14647 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CHD2O14647 CYB561-216ENST00000582297 897 ntTSL 3 BASIC24.75■■□□□ 1.55
CHD2O14647 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHD2O14647 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
CHD2O14647 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC24.75■■□□□ 1.55
CHD2O14647 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
CHD2O14647 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHD2O14647 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms