Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CACNA1AO00555 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CACNA1AO00555 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CACNA1AO00555 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CACNA1AO00555 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.75■□□□□ 0.27
CACNA1AO00555 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CACNA1AO00555 AL391422.3-201ENST00000603791 2761 ntBASIC16.75■□□□□ 0.27
CACNA1AO00555 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.75■□□□□ 0.27
CACNA1AO00555 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CACNA1AO00555 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CACNA1AO00555 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CACNA1AO00555 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.75■□□□□ 0.27
CACNA1AO00555 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.75■□□□□ 0.27
CACNA1AO00555 RN7SL589P-201ENST00000481268 310 ntBASIC16.75■□□□□ 0.27
CACNA1AO00555 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CACNA1AO00555 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CACNA1AO00555 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.75■□□□□ 0.27
CACNA1AO00555 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.75■□□□□ 0.27
CACNA1AO00555 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CACNA1AO00555 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.75■□□□□ 0.27
CACNA1AO00555 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CACNA1AO00555 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.75■□□□□ 0.27
CACNA1AO00555 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CACNA1AO00555 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CACNA1AO00555 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.74■□□□□ 0.27
CACNA1AO00555 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 AC122714.2-201ENST00000502787 707 ntBASIC16.74■□□□□ 0.27
CACNA1AO00555 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.74■□□□□ 0.27
CACNA1AO00555 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.74■□□□□ 0.27
CACNA1AO00555 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.74■□□□□ 0.27
CACNA1AO00555 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CACNA1AO00555 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CACNA1AO00555 AC004233.3-201ENST00000607794 1269 ntBASIC16.74■□□□□ 0.27
CACNA1AO00555 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CACNA1AO00555 COX11-210ENST00000639671 696 ntBASIC16.74■□□□□ 0.27
CACNA1AO00555 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CACNA1AO00555 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CACNA1AO00555 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CACNA1AO00555 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 AC112492.5-201ENST00000421897 457 ntBASIC16.74■□□□□ 0.27
CACNA1AO00555 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 IGHV3-42-201ENST00000520410 361 ntBASIC16.74■□□□□ 0.27
CACNA1AO00555 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CACNA1AO00555 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 AC026150.2-201ENST00000564693 1156 ntBASIC16.74■□□□□ 0.27
CACNA1AO00555 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.74■□□□□ 0.27
CACNA1AO00555 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CACNA1AO00555 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CACNA1AO00555 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CACNA1AO00555 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 AC079140.1-201ENST00000508039 487 ntBASIC16.73■□□□□ 0.27
CACNA1AO00555 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CACNA1AO00555 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.73■□□□□ 0.27
CACNA1AO00555 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.73■□□□□ 0.27
CACNA1AO00555 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CACNA1AO00555 DGCR5-201ENST00000399539 862 ntBASIC16.73■□□□□ 0.27
CACNA1AO00555 FXNP2-201ENST00000411625 547 ntBASIC16.73■□□□□ 0.27
CACNA1AO00555 KLF4P1-201ENST00000412782 1185 ntBASIC16.73■□□□□ 0.27
CACNA1AO00555 AL135744.1-201ENST00000565098 629 ntBASIC16.73■□□□□ 0.27
CACNA1AO00555 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.73■□□□□ 0.27
CACNA1AO00555 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 AC026120.1-201ENST00000611536 926 ntBASIC16.73■□□□□ 0.27
CACNA1AO00555 GGTLC5P-201ENST00000617623 998 ntBASIC16.73■□□□□ 0.27
CACNA1AO00555 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CACNA1AO00555 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CACNA1AO00555 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CACNA1AO00555 AL020989.1-201ENST00000422979 469 ntBASIC16.72■□□□□ 0.27
CACNA1AO00555 AC022210.1-201ENST00000449856 793 ntBASIC16.72■□□□□ 0.27
CACNA1AO00555 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CACNA1AO00555 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.72■□□□□ 0.27
CACNA1AO00555 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA1AO00555 AC140912.1-201ENST00000577171 1054 ntBASIC16.72■□□□□ 0.27
CACNA1AO00555 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.72■□□□□ 0.27
CACNA1AO00555 AC099568.2-201ENST00000609194 695 ntBASIC16.72■□□□□ 0.27
CACNA1AO00555 MIR6869-201ENST00000619434 62 ntBASIC16.72■□□□□ 0.27
CACNA1AO00555 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms