Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCRL2O00421 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.2■□□□□ 0.18
CCRL2O00421 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCRL2O00421 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCRL2O00421 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCRL2O00421 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCRL2O00421 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCRL2O00421 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCRL2O00421 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCRL2O00421 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCRL2O00421 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.2■□□□□ 0.18
CCRL2O00421 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.2■□□□□ 0.18
CCRL2O00421 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.2■□□□□ 0.18
CCRL2O00421 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCRL2O00421 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.2■□□□□ 0.18
CCRL2O00421 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCRL2O00421 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.19■□□□□ 0.18
CCRL2O00421 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.19■□□□□ 0.18
CCRL2O00421 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.19■□□□□ 0.18
CCRL2O00421 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
CCRL2O00421 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCRL2O00421 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CCRL2O00421 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCRL2O00421 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CCRL2O00421 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.19■□□□□ 0.18
CCRL2O00421 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.19■□□□□ 0.18
CCRL2O00421 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 PNMA6B-201ENST00000538162 1200 ntBASIC16.19■□□□□ 0.18
CCRL2O00421 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.19■□□□□ 0.18
CCRL2O00421 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCRL2O00421 AC098934.4-201ENST00000564127 592 ntBASIC16.19■□□□□ 0.18
CCRL2O00421 AC142086.2-201ENST00000569753 217 ntBASIC16.19■□□□□ 0.18
CCRL2O00421 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCRL2O00421 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.19■□□□□ 0.18
CCRL2O00421 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCRL2O00421 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.19■□□□□ 0.18
CCRL2O00421 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCRL2O00421 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCRL2O00421 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.19■□□□□ 0.18
CCRL2O00421 PCDHB19P-201ENST00000570871 2371 ntBASIC16.19■□□□□ 0.18
CCRL2O00421 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.19■□□□□ 0.18
CCRL2O00421 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCRL2O00421 LINC00554-201ENST00000564841 3011 ntBASIC16.19■□□□□ 0.18
CCRL2O00421 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CCRL2O00421 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.18■□□□□ 0.18
CCRL2O00421 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
CCRL2O00421 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.18■□□□□ 0.18
CCRL2O00421 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCRL2O00421 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.18■□□□□ 0.18
CCRL2O00421 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.18■□□□□ 0.18
CCRL2O00421 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.18■□□□□ 0.18
CCRL2O00421 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.18■□□□□ 0.18
CCRL2O00421 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 AC004264.1-201ENST00000608354 794 ntBASIC16.18■□□□□ 0.18
CCRL2O00421 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CCRL2O00421 MYC-209ENST00000641252 345 ntBASIC16.18■□□□□ 0.18
CCRL2O00421 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.18■□□□□ 0.18
CCRL2O00421 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCRL2O00421 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCRL2O00421 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms