Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.79■□□□□ 0.44
TLR4O00206 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TLR4O00206 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TLR4O00206 INTS4P1-201ENST00000438455 1935 ntBASIC17.79■□□□□ 0.44
TLR4O00206 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TLR4O00206 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TLR4O00206 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TLR4O00206 PMS2P1-201ENST00000431037 1228 ntBASIC17.79■□□□□ 0.44
TLR4O00206 KRT18P65-201ENST00000439811 1286 ntBASIC17.79■□□□□ 0.44
TLR4O00206 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TLR4O00206 FGFR3P6-201ENST00000457012 610 ntBASIC17.79■□□□□ 0.44
TLR4O00206 SCARNA2-201ENST00000458748 420 ntBASIC17.79■□□□□ 0.44
TLR4O00206 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.79■□□□□ 0.44
TLR4O00206 AC073648.2-201ENST00000510116 352 ntBASIC17.79■□□□□ 0.44
TLR4O00206 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TLR4O00206 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TLR4O00206 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.79■□□□□ 0.44
TLR4O00206 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR4O00206 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR4O00206 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR4O00206 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR4O00206 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TLR4O00206 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR4O00206 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.79■□□□□ 0.44
TLR4O00206 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR4O00206 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR4O00206 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR4O00206 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TLR4O00206 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.79■□□□□ 0.44
TLR4O00206 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.79■□□□□ 0.44
TLR4O00206 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TLR4O00206 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.79■□□□□ 0.44
TLR4O00206 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TLR4O00206 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.78■□□□□ 0.44
TLR4O00206 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.78■□□□□ 0.44
TLR4O00206 MIR574-201ENST00000385209 96 ntBASIC17.78■□□□□ 0.44
TLR4O00206 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.78■□□□□ 0.44
TLR4O00206 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TLR4O00206 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.78■□□□□ 0.44
TLR4O00206 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.78■□□□□ 0.44
TLR4O00206 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.78■□□□□ 0.44
TLR4O00206 AC011467.2-201ENST00000598425 242 ntBASIC17.78■□□□□ 0.44
TLR4O00206 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.78■□□□□ 0.44
TLR4O00206 AC117500.6-201ENST00000624871 588 ntBASIC17.78■□□□□ 0.44
TLR4O00206 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.78■□□□□ 0.44
TLR4O00206 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.78■□□□□ 0.44
TLR4O00206 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
TLR4O00206 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR4O00206 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.78■□□□□ 0.44
TLR4O00206 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR4O00206 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR4O00206 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.77■□□□□ 0.44
TLR4O00206 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR4O00206 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TLR4O00206 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TLR4O00206 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
TLR4O00206 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR4O00206 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR4O00206 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TLR4O00206 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.77■□□□□ 0.44
TLR4O00206 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR4O00206 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR4O00206 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.77■□□□□ 0.44
TLR4O00206 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
TLR4O00206 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TLR4O00206 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.77■□□□□ 0.44
TLR4O00206 AC018712.1-201ENST00000455767 687 ntBASIC17.77■□□□□ 0.44
TLR4O00206 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TLR4O00206 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.77■□□□□ 0.44
TLR4O00206 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.77■□□□□ 0.44
TLR4O00206 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TLR4O00206 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.77■□□□□ 0.44
TLR4O00206 AP001269.4-201ENST00000609611 512 ntBASIC17.77■□□□□ 0.44
TLR4O00206 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR4O00206 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TLR4O00206 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.77■□□□□ 0.44
TLR4O00206 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TLR4O00206 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.77■□□□□ 0.43
TLR4O00206 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TLR4O00206 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
TLR4O00206 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
TLR4O00206 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TLR4O00206 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.77■□□□□ 0.43
TLR4O00206 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TLR4O00206 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TLR4O00206 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.77■□□□□ 0.43
TLR4O00206 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.77■□□□□ 0.43
TLR4O00206 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms