Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM1O00151 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PDLIM1O00151 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM1O00151 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM1O00151 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM1O00151 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM1O00151 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM1O00151 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM1O00151 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PDLIM1O00151 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM1O00151 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.16■□□□□ 0.34
PDLIM1O00151 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM1O00151 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM1O00151 AC073195.1-201ENST00000607241 877 ntBASIC17.16■□□□□ 0.34
PDLIM1O00151 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.16■□□□□ 0.34
PDLIM1O00151 AC113410.3-201ENST00000623366 203 ntBASIC17.16■□□□□ 0.34
PDLIM1O00151 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
PDLIM1O00151 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM1O00151 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM1O00151 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PDLIM1O00151 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM1O00151 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
PDLIM1O00151 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PDLIM1O00151 PKD1P1-201ENST00000458669 6805 ntBASIC17.16■□□□□ 0.34
PDLIM1O00151 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM1O00151 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 MYLKP1-201ENST00000509077 1580 ntBASIC17.15■□□□□ 0.34
PDLIM1O00151 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 DOC2GP-204ENST00000639052 2548 ntBASIC17.15■□□□□ 0.34
PDLIM1O00151 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PDLIM1O00151 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM1O00151 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PDLIM1O00151 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM1O00151 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PDLIM1O00151 AL596275.1-201ENST00000423464 877 ntBASIC17.15■□□□□ 0.34
PDLIM1O00151 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM1O00151 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM1O00151 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.15■□□□□ 0.34
PDLIM1O00151 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.15■□□□□ 0.34
PDLIM1O00151 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PDLIM1O00151 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PDLIM1O00151 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PDLIM1O00151 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PDLIM1O00151 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM1O00151 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.15■□□□□ 0.34
PDLIM1O00151 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PDLIM1O00151 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDLIM1O00151 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PDLIM1O00151 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.14■□□□□ 0.33
PDLIM1O00151 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PDLIM1O00151 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PDLIM1O00151 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.14■□□□□ 0.33
PDLIM1O00151 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PDLIM1O00151 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PDLIM1O00151 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM1O00151 KSR1P1-201ENST00000446298 240 ntBASIC17.14■□□□□ 0.33
PDLIM1O00151 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.14■□□□□ 0.33
PDLIM1O00151 AP002982.1-201ENST00000492365 877 ntBASIC17.14■□□□□ 0.33
PDLIM1O00151 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.14■□□□□ 0.33
PDLIM1O00151 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM1O00151 C8orf49-201ENST00000525043 1968 ntBASIC17.14■□□□□ 0.33
PDLIM1O00151 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PDLIM1O00151 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.14■□□□□ 0.33
PDLIM1O00151 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM1O00151 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
PDLIM1O00151 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM1O00151 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PDLIM1O00151 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM1O00151 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.13■□□□□ 0.33
PDLIM1O00151 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.13■□□□□ 0.33
PDLIM1O00151 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms