Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 AL139384.1-201ENST00000612143 3047 ntBASIC15.37■□□□□ 0.05
TMEM235A6NFC5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 RN7SL471P-201ENST00000580476 299 ntBASIC15.37■□□□□ 0.05
TMEM235A6NFC5 AP000692.2-201ENST00000608391 879 ntBASIC15.37■□□□□ 0.05
TMEM235A6NFC5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.37■□□□□ 0.05
TMEM235A6NFC5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.37■□□□□ 0.05
TMEM235A6NFC5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 AL138688.1-201ENST00000624851 1594 ntBASIC15.36■□□□□ 0.05
TMEM235A6NFC5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 AC133963.1-201ENST00000504166 1679 ntBASIC15.36■□□□□ 0.05
TMEM235A6NFC5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.36■□□□□ 0.05
TMEM235A6NFC5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 MESTP1-201ENST00000404287 994 ntBASIC15.35■□□□□ 0.05
TMEM235A6NFC5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 AF186192.3-201ENST00000583427 947 ntBASIC15.35■□□□□ 0.05
TMEM235A6NFC5 AC073195.1-201ENST00000607241 877 ntBASIC15.35■□□□□ 0.05
TMEM235A6NFC5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEM235A6NFC5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms