Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 AL136038.4-201ENST00000603606 1261 ntBASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 AC140113.3-201ENST00000605663 199 ntBASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 AC073912.3-201ENST00000624414 853 ntBASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 AC097493.4-201ENST00000641197 219 ntBASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 AC073508.3-201ENST00000619697 1419 ntBASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM49BA6NDI0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 AC092597.1-201ENST00000487352 616 ntBASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 AC024563.2-201ENST00000603282 481 ntBASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM49BA6NDI0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 AC080080.1-201ENST00000625121 2420 ntBASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 AC117947.1-201ENST00000427448 529 ntBASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 AL137013.1-201ENST00000432946 1228 ntBASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 YBX1P2-201ENST00000489612 999 ntBASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 AC113404.2-201ENST00000507884 177 ntBASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 AC005363.2-201ENST00000618631 242 ntBASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms