Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC24.21■■□□□ 1.47
SBNO1A3KN83 AC103564.2-201ENST00000432853 1299 ntBASIC24.21■■□□□ 1.47
SBNO1A3KN83 MAL2-202ENST00000531508 892 ntTSL 3 BASIC24.21■■□□□ 1.47
SBNO1A3KN83 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC24.21■■□□□ 1.47
SBNO1A3KN83 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC24.21■■□□□ 1.47
SBNO1A3KN83 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
SBNO1A3KN83 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SBNO1A3KN83 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SBNO1A3KN83 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC24.21■■□□□ 1.47
SBNO1A3KN83 AL353593.2-201ENST00000602529 1483 ntBASIC24.21■■□□□ 1.47
SBNO1A3KN83 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SBNO1A3KN83 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SBNO1A3KN83 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SBNO1A3KN83 AL020989.1-201ENST00000422979 469 ntBASIC24.2■■□□□ 1.46
SBNO1A3KN83 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
SBNO1A3KN83 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
SBNO1A3KN83 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SBNO1A3KN83 PUS1-205ENST00000535067 838 ntTSL 3 BASIC24.2■■□□□ 1.46
SBNO1A3KN83 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC24.2■■□□□ 1.46
SBNO1A3KN83 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC24.2■■□□□ 1.46
SBNO1A3KN83 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC24.2■■□□□ 1.46
SBNO1A3KN83 AC092364.2-202ENST00000597012 1073 ntBASIC24.2■■□□□ 1.46
SBNO1A3KN83 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SBNO1A3KN83 AL031598.1-201ENST00000561511 1773 ntBASIC24.2■■□□□ 1.46
SBNO1A3KN83 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SBNO1A3KN83 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC24.2■■□□□ 1.46
SBNO1A3KN83 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
SBNO1A3KN83 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SBNO1A3KN83 NCF1C-201ENST00000438382 1427 ntBASIC24.19■■□□□ 1.46
SBNO1A3KN83 CD82-202ENST00000342935 967 ntTSL 5 BASIC24.19■■□□□ 1.46
SBNO1A3KN83 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
SBNO1A3KN83 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC24.19■■□□□ 1.46
SBNO1A3KN83 MIR770-201ENST00000390219 98 ntBASIC24.19■■□□□ 1.46
SBNO1A3KN83 AL035633.1-201ENST00000406139 838 ntBASIC24.19■■□□□ 1.46
SBNO1A3KN83 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC24.19■■□□□ 1.46
SBNO1A3KN83 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC24.19■■□□□ 1.46
SBNO1A3KN83 RPS15P9-201ENST00000494093 319 ntBASIC24.19■■□□□ 1.46
SBNO1A3KN83 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
SBNO1A3KN83 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC24.19■■□□□ 1.46
SBNO1A3KN83 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SBNO1A3KN83 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SBNO1A3KN83 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC24.19■■□□□ 1.46
SBNO1A3KN83 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SBNO1A3KN83 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC24.18■■□□□ 1.46
SBNO1A3KN83 SPCS2P1-201ENST00000561636 679 ntBASIC24.18■■□□□ 1.46
SBNO1A3KN83 PDPK2P-202ENST00000562415 1191 ntBASIC24.18■■□□□ 1.46
SBNO1A3KN83 CYB561-217ENST00000582997 877 ntTSL 5 BASIC24.18■■□□□ 1.46
SBNO1A3KN83 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC24.18■■□□□ 1.46
SBNO1A3KN83 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC24.18■■□□□ 1.46
SBNO1A3KN83 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
SBNO1A3KN83 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC24.18■■□□□ 1.46
SBNO1A3KN83 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
SBNO1A3KN83 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC24.18■■□□□ 1.46
SBNO1A3KN83 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SBNO1A3KN83 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC24.17■■□□□ 1.46
SBNO1A3KN83 AL031432.2-201ENST00000566714 459 ntBASIC24.17■■□□□ 1.46
SBNO1A3KN83 AL928711.1-201ENST00000570165 459 ntBASIC24.17■■□□□ 1.46
SBNO1A3KN83 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
SBNO1A3KN83 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SBNO1A3KN83 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SBNO1A3KN83 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC24.17■■□□□ 1.46
SBNO1A3KN83 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC24.17■■□□□ 1.46
SBNO1A3KN83 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SBNO1A3KN83 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.17■■□□□ 1.46
SBNO1A3KN83 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
SBNO1A3KN83 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SBNO1A3KN83 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SBNO1A3KN83 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
SBNO1A3KN83 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SBNO1A3KN83 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SBNO1A3KN83 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 SYS1-203ENST00000414310 795 ntTSL 3 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SBNO1A3KN83 CEND1P1-201ENST00000451006 455 ntBASIC24.16■■□□□ 1.46
SBNO1A3KN83 PON3-205ENST00000451904 1053 ntTSL 3 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SBNO1A3KN83 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 RIN3-211ENST00000557762 517 ntTSL 3 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 AC106028.4-201ENST00000614509 607 ntBASIC24.16■■□□□ 1.46
SBNO1A3KN83 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SBNO1A3KN83 AC148477.5-201ENST00000625164 1645 ntBASIC24.16■■□□□ 1.46
SBNO1A3KN83 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SBNO1A3KN83 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC24.16■■□□□ 1.46
SBNO1A3KN83 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms