Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 AC009053.2-201ENST00000563701 2365 ntBASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 AC011270.2-201ENST00000624293 2550 ntBASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 BX664615.1-201ENST00000443558 458 ntBASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 AC099398.1-201ENST00000567919 2776 ntBASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA11Q9Y5H2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGA11Q9Y5H2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGA11Q9Y5H2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.46■□□□□ 0.38
PCDHGA11Q9Y5H2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGA11Q9Y5H2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.38
PCDHGA11Q9Y5H2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 TERF1P1-201ENST00000311003 1181 ntBASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 RASA4DP-201ENST00000460726 1199 ntBASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 SIRPAP1-201ENST00000448467 1770 ntBASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms